Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.08□□□□□ -1.6
SPG7Q9UQ90 AC113618.1-201ENST00000416747 285 ntBASIC5.08□□□□□ -1.6
SPG7Q9UQ90 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.08□□□□□ -1.6
SPG7Q9UQ90 AL049874.1-201ENST00000489560 388 ntBASIC5.08□□□□□ -1.6
SPG7Q9UQ90 AC026801.1-201ENST00000497178 464 ntBASIC5.08□□□□□ -1.6
SPG7Q9UQ90 MLLT10P2-201ENST00000506434 249 ntBASIC5.08□□□□□ -1.6
SPG7Q9UQ90 RNA5SP164-201ENST00000516533 110 ntBASIC5.08□□□□□ -1.6
SPG7Q9UQ90 RNU6-1046P-201ENST00000516538 107 ntBASIC5.08□□□□□ -1.6
SPG7Q9UQ90 SNORA31.20-201ENST00000517111 133 ntBASIC5.08□□□□□ -1.6
SPG7Q9UQ90 AC087854.1-201ENST00000519706 414 ntBASIC5.08□□□□□ -1.6
SPG7Q9UQ90 AC026371.1-201ENST00000551867 419 ntBASIC5.08□□□□□ -1.6
SPG7Q9UQ90 CYP4A43P-201ENST00000568156 121 ntBASIC5.08□□□□□ -1.6
SPG7Q9UQ90 AL161756.2-201ENST00000604597 246 ntBASIC5.08□□□□□ -1.6
SPG7Q9UQ90 AP000654.2-201ENST00000605633 586 ntBASIC5.08□□□□□ -1.6
SPG7Q9UQ90 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.08□□□□□ -1.6
SPG7Q9UQ90 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.08□□□□□ -1.6
SPG7Q9UQ90 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.08□□□□□ -1.6
SPG7Q9UQ90 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.08□□□□□ -1.6
SPG7Q9UQ90 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.08□□□□□ -1.6
SPG7Q9UQ90 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SPG7Q9UQ90 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 SNORD3E-201ENST00000362899 217 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 RNU6-173P-201ENST00000364215 104 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 RNU6-371P-201ENST00000364283 108 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 SNORA75B-201ENST00000384053 137 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 RNU6-95P-201ENST00000384697 107 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 MIR199A2-201ENST00000385289 110 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 RPS29P4-201ENST00000414733 161 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 AC244098.2-201ENST00000422068 99 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 HMGB1P37-201ENST00000439613 609 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 AL359672.1-201ENST00000442302 409 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 AP000942.1-201ENST00000463969 747 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 AC106707.2-201ENST00000484182 374 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 AC108860.1-201ENST00000484521 383 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 AC097473.1-201ENST00000508142 408 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 PTP4A1P4-201ENST00000512479 322 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 RNU6-976P-201ENST00000516086 111 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 Y_RNA.708-201ENST00000516950 96 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 RN7SKP295-201ENST00000517264 153 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 SNRPGP16-201ENST00000533275 226 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 MIR5692A1-201ENST00000580523 69 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 AC073539.2-201ENST00000597113 165 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 AC009229.3-201ENST00000608056 282 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SPG7Q9UQ90 MTND4P1-201ENST00000457501 1466 ntBASIC5.07□□□□□ -1.6
SPG7Q9UQ90 AC090337.1-201ENST00000579651 2074 ntBASIC5.06□□□□□ -1.6
SPG7Q9UQ90 MTND5P16-201ENST00000460269 1703 ntBASIC5.06□□□□□ -1.6
SPG7Q9UQ90 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SPG7Q9UQ90 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SPG7Q9UQ90 AC138393.1-203ENST00000327086 343 ntBASIC5.06□□□□□ -1.6
SPG7Q9UQ90 RNU1-108P-201ENST00000362556 161 ntBASIC5.06□□□□□ -1.6
SPG7Q9UQ90 Y_RNA.144-201ENST00000363521 113 ntBASIC5.06□□□□□ -1.6
SPG7Q9UQ90 RNU6-890P-201ENST00000384121 107 ntBASIC5.06□□□□□ -1.6
SPG7Q9UQ90 RNU6-214P-201ENST00000384130 107 ntBASIC5.06□□□□□ -1.6
SPG7Q9UQ90 MIR34B-201ENST00000385076 84 ntBASIC5.06□□□□□ -1.6
SPG7Q9UQ90 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.06□□□□□ -1.6
SPG7Q9UQ90 HSPD1P21-201ENST00000436541 245 ntBASIC5.06□□□□□ -1.6
SPG7Q9UQ90 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.06□□□□□ -1.6
SPG7Q9UQ90 AC110768.1-201ENST00000509222 400 ntBASIC5.06□□□□□ -1.6
SPG7Q9UQ90 AC104619.4-201ENST00000510773 249 ntBASIC5.06□□□□□ -1.6
SPG7Q9UQ90 AC022695.1-201ENST00000522089 237 ntBASIC5.06□□□□□ -1.6
SPG7Q9UQ90 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.06□□□□□ -1.6
SPG7Q9UQ90 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.06□□□□□ -1.6
SPG7Q9UQ90 AC092608.2-201ENST00000624427 218 ntBASIC5.06□□□□□ -1.6
SPG7Q9UQ90 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SPG7Q9UQ90 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SPG7Q9UQ90 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SPG7Q9UQ90 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SPG7Q9UQ90 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SPG7Q9UQ90 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.06□□□□□ -1.6
SPG7Q9UQ90 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.06□□□□□ -1.6
SPG7Q9UQ90 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.05□□□□□ -1.6
SPG7Q9UQ90 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SPG7Q9UQ90 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SPG7Q9UQ90 RNU6-1115P-201ENST00000362490 106 ntBASIC5.05□□□□□ -1.6
SPG7Q9UQ90 RNU6-1279P-201ENST00000383917 103 ntBASIC5.05□□□□□ -1.6
SPG7Q9UQ90 RNU6-306P-201ENST00000384617 107 ntBASIC5.05□□□□□ -1.6
SPG7Q9UQ90 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SPG7Q9UQ90 RNU6-1050P-201ENST00000410388 107 ntBASIC5.05□□□□□ -1.6
SPG7Q9UQ90 AL513331.1-201ENST00000411908 397 ntBASIC5.05□□□□□ -1.6
SPG7Q9UQ90 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.05□□□□□ -1.6
SPG7Q9UQ90 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.05□□□□□ -1.6
SPG7Q9UQ90 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms