Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 Y_RNA.708-201ENST00000516950 96 ntBASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 AC090115.3-201ENST00000553218 849 ntBASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 AL161713.1-201ENST00000555538 145 ntBASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 AC005357.1-201ENST00000588399 301 ntBASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 AL512605.2-201ENST00000592972 256 ntBASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 AC008162.1-201ENST00000604718 254 ntBASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 AL670379.4-201ENST00000605279 254 ntBASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 PRR13P7-201ENST00000605538 430 ntBASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PACSIN3Q9UKS6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 AL139811.1-201ENST00000424779 2299 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 RNVU1-3-201ENST00000364313 161 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 RNU6-593P-201ENST00000364716 112 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 Y_RNA.389-201ENST00000383924 113 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 RNU6-432P-201ENST00000384196 109 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 RNU6-328P-201ENST00000390887 106 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 RNU6-516P-201ENST00000411381 104 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 RHEBP3-201ENST00000411920 351 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 AC236972.1-201ENST00000433225 199 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 OR4C10P-201ENST00000434991 931 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 PCNPP5-201ENST00000452246 481 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 AC104564.1-201ENST00000493028 407 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 MRPS35P2-201ENST00000508242 191 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 RNU6-1332P-201ENST00000516666 104 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 RNU6-685P-201ENST00000517088 95 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 DEFB108D-201ENST00000527787 222 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 AC106782.4-201ENST00000568264 210 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 AC018462.2-201ENST00000605375 395 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 MIR7151-201ENST00000617477 60 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 U2.1-201ENST00000618978 145 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 AC112484.5-201ENST00000624189 228 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 AC244205.2-202ENST00000635781 342 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 AC091812.1-201ENST00000432235 1948 ntBASIC3.76□□□□□ -1.81
PACSIN3Q9UKS6 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 AC005592.1-201ENST00000566527 1640 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 RNU6-99P-201ENST00000364721 107 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 SMIM11P1-201ENST00000369586 178 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 RNU6-306P-201ENST00000384617 107 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 RNU11-4P-201ENST00000391149 133 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 AL138878.1-201ENST00000405131 347 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 RPS15AP40-201ENST00000419621 391 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 RPL21P109-201ENST00000422213 475 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 RPL21P112-201ENST00000434403 463 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 HMGB1P37-201ENST00000439613 609 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 SUMO1P3-201ENST00000439961 304 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 RANP8-201ENST00000444720 713 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 NDUFS5P3-201ENST00000450668 321 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 SNORD97-201ENST00000459187 142 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 AC087884.1-201ENST00000469738 328 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 AC117503.1-201ENST00000472241 394 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 AL132838.2-201ENST00000492041 314 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 RPL23AP55-201ENST00000498163 452 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 AC026402.1-201ENST00000513642 170 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 RNU6-1069P-201ENST00000516612 133 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 RNA5SP384-201ENST00000516615 116 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 AL365434.2-201ENST00000607979 234 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 RNA5SP196-201ENST00000625967 102 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 MTCO1P24-201ENST00000515438 1558 ntBASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.75□□□□□ -1.81
PACSIN3Q9UKS6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.74□□□□□ -1.81
PACSIN3Q9UKS6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.74□□□□□ -1.81
PACSIN3Q9UKS6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PACSIN3Q9UKS6 AC103710.2-202ENST00000641454 2853 ntBASIC3.74□□□□□ -1.81
PACSIN3Q9UKS6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.74□□□□□ -1.81
PACSIN3Q9UKS6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms