Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC021205.2-201ENST00000480069 347 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.1□□□□□ -1.75
USP25Q9UHP3 AC116562.3-201ENST00000506136 177 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 RNU6-1314P-201ENST00000517139 104 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.1□□□□□ -1.75
USP25Q9UHP3 PSMA2P1-201ENST00000526365 646 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AC068587.5-201ENST00000528506 175 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 OR8R1P-201ENST00000543943 764 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.1□□□□□ -1.75
USP25Q9UHP3 AC011611.1-201ENST00000552179 197 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.1□□□□□ -1.75
USP25Q9UHP3 MIR4775-201ENST00000581168 75 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AL670379.6-201ENST00000603753 252 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AL670379.11-201ENST00000604059 253 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AC008162.1-201ENST00000604718 254 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AL670379.1-201ENST00000604752 252 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AL670379.5-201ENST00000605253 252 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AL670379.12-201ENST00000605291 253 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AL670379.8-201ENST00000605353 252 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AL670379.7-201ENST00000605823 252 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.1□□□□□ -1.75
USP25Q9UHP3 AC064836.2-201ENST00000609491 462 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.1□□□□□ -1.75
USP25Q9UHP3 MIR6875-201ENST00000617506 72 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.1□□□□□ -1.75
USP25Q9UHP3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
USP25Q9UHP3 AC005183.1-201ENST00000603687 1979 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 ASNSP3-201ENST00000451989 1306 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 AL136164.4-201ENST00000625013 2135 ntBASIC4.1□□□□□ -1.75
USP25Q9UHP3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.1□□□□□ -1.75
USP25Q9UHP3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USP25Q9UHP3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.09□□□□□ -1.75
USP25Q9UHP3 MIR134-201ENST00000385258 73 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 EI24P2-201ENST00000397776 1076 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 AL356057.2-201ENST00000403318 432 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 U3.39-201ENST00000408569 239 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 RNU2-36P-201ENST00000410361 191 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 MTND3P8-201ENST00000412909 339 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 RAC1P6-201ENST00000423911 575 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 ERLEC1P1-201ENST00000433806 578 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.09□□□□□ -1.75
USP25Q9UHP3 MRPL50P4-201ENST00000446432 475 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 RPS3AP46-201ENST00000448352 682 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.09□□□□□ -1.75
USP25Q9UHP3 MTND3P16-201ENST00000452205 344 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 RPL23AP11-201ENST00000475260 469 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 RPS4XP22-201ENST00000480755 780 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.09□□□□□ -1.75
USP25Q9UHP3 RN7SL432P-201ENST00000484057 298 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 HMGN1P13-201ENST00000505795 138 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 AC091885.1-201ENST00000506658 268 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.09□□□□□ -1.75
USP25Q9UHP3 AC112206.3-201ENST00000514578 389 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 SNORA19.2-201ENST00000516013 114 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 Y_RNA.701-201ENST00000516812 110 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 RNU7-30P-201ENST00000516835 62 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 RN7SKP258-201ENST00000517151 304 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 HMGB1P41-201ENST00000520234 440 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 AC107953.1-201ENST00000522216 297 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.09□□□□□ -1.75
USP25Q9UHP3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.09□□□□□ -1.75
USP25Q9UHP3 AC078814.3-201ENST00000553036 491 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.09□□□□□ -1.75
USP25Q9UHP3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.09□□□□□ -1.75
USP25Q9UHP3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
USP25Q9UHP3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.09□□□□□ -1.75
USP25Q9UHP3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.09□□□□□ -1.75
USP25Q9UHP3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 RNU6-89P-201ENST00000606519 100 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 AL050343.2-201ENST00000607338 280 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 AC002076.2-201ENST00000617362 122 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 AC090574.1-201ENST00000623186 233 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 AC005858.4-201ENST00000623191 700 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 TPTEP1-208ENST00000636884 213 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
USP25Q9UHP3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
USP25Q9UHP3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP25Q9UHP3 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.09□□□□□ -1.75
USP25Q9UHP3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
USP25Q9UHP3 AC068647.1-201ENST00000489539 2265 ntBASIC4.09□□□□□ -1.76
USP25Q9UHP3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
USP25Q9UHP3 AC007256.1-201ENST00000392253 2765 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.08□□□□□ -1.76
USP25Q9UHP3 AC073343.1-201ENST00000328239 651 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.08□□□□□ -1.76
USP25Q9UHP3 FRG1CP-201ENST00000358464 769 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 RNU6-552P-201ENST00000362869 119 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 RNU5E-6P-201ENST00000365574 115 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 RNU4-20P-201ENST00000365601 151 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 RNU6-805P-201ENST00000365643 106 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP25Q9UHP3 SNORA1.3-201ENST00000384676 136 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 RNU6-903P-201ENST00000391270 109 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 NDUFS5P1-201ENST00000405668 289 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 RNA5SP293-201ENST00000410527 113 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 RNU6-628P-201ENST00000410675 107 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.08□□□□□ -1.76
USP25Q9UHP3 AL139247.1-201ENST00000422768 325 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms