Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 AC008958.1-201ENST00000511047 682 ntBASIC5□□□□□ -1.61
CXXC1Q9P0U4 AC034114.1-201ENST00000520293 285 ntBASIC5□□□□□ -1.61
CXXC1Q9P0U4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5□□□□□ -1.61
CXXC1Q9P0U4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5□□□□□ -1.61
CXXC1Q9P0U4 AC078938.1-201ENST00000620993 318 ntBASIC5□□□□□ -1.61
CXXC1Q9P0U4 SCARNA4-202ENST00000625402 129 ntBASIC5□□□□□ -1.61
CXXC1Q9P0U4 AC243829.7-201ENST00000633081 225 ntBASIC5□□□□□ -1.61
CXXC1Q9P0U4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CXXC1Q9P0U4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5□□□□□ -1.61
CXXC1Q9P0U4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5□□□□□ -1.61
CXXC1Q9P0U4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5□□□□□ -1.61
CXXC1Q9P0U4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5□□□□□ -1.61
CXXC1Q9P0U4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXXC1Q9P0U4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5□□□□□ -1.61
CXXC1Q9P0U4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CXXC1Q9P0U4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5□□□□□ -1.61
CXXC1Q9P0U4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5□□□□□ -1.61
CXXC1Q9P0U4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CXXC1Q9P0U4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CXXC1Q9P0U4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CXXC1Q9P0U4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 Y_RNA.64-201ENST00000362845 102 ntBASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 SNORD50.1-201ENST00000362987 71 ntBASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 U3.6-201ENST00000363622 211 ntBASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 Y_RNA.376-201ENST00000365638 108 ntBASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 Y_RNA.483-201ENST00000384380 101 ntBASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 MT-TW-201ENST00000387382 68 ntBASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 AC011998.1-201ENST00000433403 117 ntBASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 RNU6-897P-201ENST00000517135 105 ntBASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 AC005046.1-201ENST00000608515 625 ntBASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 U6.99-201ENST00000637524 83 ntBASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXXC1Q9P0U4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 RNU1-132P-201ENST00000364300 164 ntBASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 Z98745.1-201ENST00000402553 494 ntBASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 ARL5AP4-201ENST00000430731 512 ntBASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 AC109329.1-201ENST00000518744 317 ntBASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 MIR4782-201ENST00000577987 79 ntBASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 AL161756.2-201ENST00000604597 246 ntBASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 AC006077.1-201ENST00000604746 343 ntBASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 AC106871.1-201ENST00000568324 3102 ntBASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 ZFRP1-201ENST00000457579 2970 ntBASIC4.98□□□□□ -1.61
CXXC1Q9P0U4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 PCAT14-202ENST00000627127 3935 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 MARK2P15-201ENST00000432204 2186 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 U3.13-201ENST00000364804 214 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 RNA5SP283-201ENST00000365604 119 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 RN7SKP16-201ENST00000410180 299 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 RNU2-38P-201ENST00000410856 79 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 RPL39P38-201ENST00000467018 153 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 AC078918.1-201ENST00000498515 228 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 PARP4P3-201ENST00000510265 317 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 Vault.1-201ENST00000516474 102 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 AC136601.2-201ENST00000604356 474 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 U4.7-201ENST00000638126 106 ntBASIC4.97□□□□□ -1.61
CXXC1Q9P0U4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms