Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AC072039.1-201ENST00000477611 581 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AC119751.4-201ENST00000507498 357 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AC112673.1-201ENST00000513168 575 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 SNORA31.3-201ENST00000516029 96 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 RNA5SP320-201ENST00000516263 124 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 SCARNA3-201ENST00000517097 143 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 RNU6-64P-201ENST00000517119 105 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AC121758.2-201ENST00000553271 193 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AC021739.1-201ENST00000559631 174 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AC136618.2-201ENST00000575091 400 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 MIR4293-201ENST00000584305 78 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 RPP40P2-201ENST00000603596 712 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AL645944.1-201ENST00000603857 493 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AL355598.1-201ENST00000604169 202 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 RNU4-5P-201ENST00000607255 135 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AC097468.3-201ENST00000607956 456 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AC072039.2-201ENST00000608883 439 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AC103710.1-201ENST00000610003 901 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AC097478.2-201ENST00000610572 514 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AL161423.1-201ENST00000613700 262 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AL590808.1-201ENST00000618696 141 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 AC025034.2-201ENST00000623264 286 ntBASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
KLHL28Q9NXS3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AC092125.1-201ENST00000562568 1995 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 UBE2L2-201ENST00000254302 429 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 RNU6-723P-201ENST00000383973 107 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 RNU6-636P-201ENST00000384598 107 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 RNU6-925P-201ENST00000384629 104 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 RNU6-1242P-201ENST00000391052 103 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AL021407.1-201ENST00000404531 386 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AC009963.1-201ENST00000417265 157 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AL109913.1-201ENST00000421173 514 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AC013410.2-201ENST00000422627 201 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AL353729.1-201ENST00000425044 720 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 FCF1P1-201ENST00000432690 571 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 RPL36AP53-201ENST00000432891 316 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 PTENP1-201ENST00000447117 1215 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AL009048.1-201ENST00000450437 298 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 RPL37P6-201ENST00000460682 294 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AC128713.1-201ENST00000471495 306 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 MTATP6P9-201ENST00000515039 680 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 RNA5SP24-201ENST00000516478 95 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 RNU6-703P-201ENST00000516946 107 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AC087241.2-201ENST00000535801 324 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AP002770.2-201ENST00000543613 532 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 SNORD53-201ENST00000579969 78 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AC005261.5-201ENST00000596280 355 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AL391001.1-201ENST00000602747 715 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AC068790.3-201ENST00000602988 553 ntBASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KLHL28Q9NXS3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 ZNF29P-201ENST00000225587 168 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AL359511.1-201ENST00000402970 211 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 MIR1261-201ENST00000408659 82 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 ELOCP9-201ENST00000418624 239 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 ZNF90P2-204ENST00000419323 1075 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 USP9YP24-201ENST00000434374 697 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 USP9YP17-201ENST00000444617 696 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 DYNLL1P5-201ENST00000467158 270 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 GZMAP1-201ENST00000503054 631 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 UBE2V1P12-201ENST00000503954 474 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 RPF2P2-201ENST00000504693 896 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 ANXA2P1-201ENST00000505539 926 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 SNORA31.11-201ENST00000516528 139 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AP003467.2-201ENST00000520175 319 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 AC006199.1-201ENST00000548728 219 ntBASIC2.22□□□□□ -2.05
KLHL28Q9NXS3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms