Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC073464.1-201ENST00000429823 534 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 MRPL50P4-201ENST00000446432 475 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC132479.1-201ENST00000449160 144 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 HSPE1P6-201ENST00000479457 291 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 TBCAP3-201ENST00000512475 312 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 SNORA70.24-201ENST00000517233 118 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AP000889.1-201ENST00000530968 660 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC128657.1-201ENST00000549459 145 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC124947.2-202ENST00000552735 133 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 DNAJC8P1-201ENST00000554535 372 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AL355836.1-201ENST00000555951 870 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC105224.1-201ENST00000587055 421 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AL391646.1-201ENST00000603860 190 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC092954.2-201ENST00000609103 430 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC010133.1-201ENST00000615809 842 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 SNHG22-203ENST00000617833 660 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AP003122.6-201ENST00000623831 495 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AC018692.3-201ENST00000623929 123 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 SEPT14P19-203ENST00000633205 211 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AL034408.1-202ENST00000636088 415 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 CR848007.1-201ENST00000442354 1699 ntBASIC2.78□□□□□ -1.96
NDE1Q9NXR1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NDE1Q9NXR1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.77□□□□□ -1.97
NDE1Q9NXR1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.77□□□□□ -1.97
NDE1Q9NXR1 MIR26A1-201ENST00000362205 77 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 Y_RNA.22-201ENST00000362492 102 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 RNU6-223P-201ENST00000362830 107 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 Y_RNA.159-201ENST00000363674 87 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 Y_RNA.554-201ENST00000384672 102 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 MIR1-2-201ENST00000384961 85 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
NDE1Q9NXR1 CALM2P3-201ENST00000400429 449 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 UBE2V1P10-201ENST00000414685 269 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 AC137499.1-201ENST00000427602 88 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 AC002486.1-201ENST00000435098 391 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.77□□□□□ -1.97
NDE1Q9NXR1 RPS29P12-201ENST00000460178 152 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 AC007182.2-201ENST00000489251 402 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.77□□□□□ -1.97
NDE1Q9NXR1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.77□□□□□ -1.97
NDE1Q9NXR1 SNORA31.8-201ENST00000516327 108 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
NDE1Q9NXR1 HPRT1P3-201ENST00000539521 576 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.77□□□□□ -1.97
NDE1Q9NXR1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.77□□□□□ -1.97
NDE1Q9NXR1 AL606834.2-201ENST00000602954 668 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 AC012468.1-201ENST00000604888 430 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 AL121992.2-201ENST00000606262 256 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 AC126118.1-201ENST00000607744 628 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 SDR42E1P2-201ENST00000614861 481 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 AC124864.2-201ENST00000624736 186 ntBASIC2.77□□□□□ -1.97
NDE1Q9NXR1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
NDE1Q9NXR1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NDE1Q9NXR1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.77□□□□□ -1.97
NDE1Q9NXR1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NDE1Q9NXR1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 Y_RNA.1-201ENST00000352915 104 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 RNU1-33P-201ENST00000364249 162 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 SNORD56.5-201ENST00000364281 72 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 DEFA7P-201ENST00000382676 285 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 RNU6-701P-201ENST00000384059 107 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 MIR491-201ENST00000384877 84 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 RNU2-9P-201ENST00000410194 145 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 RAB9AP3-201ENST00000412737 573 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 RPS29P4-201ENST00000414733 161 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AL353193.1-201ENST00000421444 268 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 RAB9AP1-201ENST00000449393 573 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 RPS23P3-201ENST00000470993 430 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 HMGB1P29-201ENST00000505659 499 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AC022690.1-201ENST00000526681 550 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AC011979.2-201ENST00000527568 352 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 TPRKBP2-201ENST00000565969 475 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 UBL5P2-201ENST00000583788 219 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AL356575.1-201ENST00000603008 283 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms