Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC025750.2-201ENST00000442609 450 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 AL049873.1-201ENST00000480540 376 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 AC103975.1-201ENST00000482506 483 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 ARL2BPP2-201ENST00000550907 489 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 HMGN1P30-201ENST00000589286 268 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 AC073544.2-201ENST00000601155 540 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 AL451064.1-201ENST00000607718 471 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 AP003399.1-201ENST00000637534 361 ntBASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.49□□□□□ -1.85
SMC4Q9NTJ3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 RNU6-14P-201ENST00000384630 106 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 RNU6-297P-201ENST00000384636 107 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 RNU2-36P-201ENST00000410361 191 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 RNU2-8P-201ENST00000410727 190 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 RNA5SP21-201ENST00000410917 96 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 AC010153.1-201ENST00000432862 727 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 SNRPEP9-201ENST00000436794 238 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 USP9YP29-201ENST00000445112 563 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 RPL39P40-201ENST00000445481 146 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 AL360221.1-201ENST00000445989 335 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 DDX3P2-201ENST00000446138 111 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 MRPL50P4-201ENST00000446432 475 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 AC009961.3-201ENST00000449832 765 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 RNA5SP269-201ENST00000459032 137 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 AP001486.1-201ENST00000463339 476 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 NDUFB4P2-201ENST00000509515 391 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 RN7SKP132-201ENST00000516001 208 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 Y_RNA.672-201ENST00000516289 104 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 Y_RNA.695-201ENST00000516715 107 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 RNU6-1092P-201ENST00000516955 87 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 EIF4BP1-201ENST00000554881 351 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 AC009977.1-201ENST00000586015 570 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 ELOCP29-201ENST00000588193 334 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 BNIP3P8-201ENST00000597863 560 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 AC068276.1-201ENST00000605793 379 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 AC245008.1-201ENST00000608123 476 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 MIR7106-201ENST00000612419 65 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 AL365361.1-201ENST00000566942 3481 ntBASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SMC4Q9NTJ3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 RNU6-960P-201ENST00000364056 120 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 RNU6-701P-201ENST00000384059 107 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 SNORD88.1-201ENST00000408684 91 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 AC016907.1-201ENST00000419483 435 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 RPS15AP12-201ENST00000419498 388 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 AL365338.1-201ENST00000422282 858 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 AC104651.1-201ENST00000427559 735 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 FABP5P15-201ENST00000453566 214 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 AC010587.1-201ENST00000505809 469 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 AC114786.4-201ENST00000508771 728 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 RNA5SP337-201ENST00000517007 109 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 AL359212.1-201ENST00000556608 614 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 MIR4298-201ENST00000584380 73 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 AC007619.2-201ENST00000605743 379 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 AC110079.1-202ENST00000635213 138 ntBASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SMC4Q9NTJ3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 UBE2L2-201ENST00000254302 429 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 FGF7P2-201ENST00000332473 296 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 Y_RNA.77-201ENST00000362962 107 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 RNU1-105P-201ENST00000363470 161 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AL122016.1-201ENST00000403365 367 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 BTF3L4P3-201ENST00000418879 476 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 HMGN2P30-201ENST00000423237 256 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AC119618.1-201ENST00000434191 222 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 USP9YP15-201ENST00000442391 422 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 NEFMP1-201ENST00000443423 1006 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 MTCO1P19-201ENST00000443487 500 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 MTND6P13-201ENST00000443510 523 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AC233702.1-201ENST00000482905 502 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AC098799.2-201ENST00000509466 868 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AC022447.1-201ENST00000515358 464 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 RNA5SP471-201ENST00000516971 106 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms