Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.47□□□□□ -2.33
SMCO4Q9NRQ5 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SMCO4Q9NRQ5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.47□□□□□ -2.33
SMCO4Q9NRQ5 AC092470.1-201ENST00000546187 132 ntBASIC0.47□□□□□ -2.33
SMCO4Q9NRQ5 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.47□□□□□ -2.33
SMCO4Q9NRQ5 RPS3AP4-201ENST00000555161 764 ntBASIC0.47□□□□□ -2.33
SMCO4Q9NRQ5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.47□□□□□ -2.33
SMCO4Q9NRQ5 AC012669.1-201ENST00000603209 283 ntBASIC0.47□□□□□ -2.33
SMCO4Q9NRQ5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
SMCO4Q9NRQ5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 NPM1P10-201ENST00000398310 865 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 ZNF863P-201ENST00000426746 417 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 AL365400.1-201ENST00000431854 640 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 AL353691.1-201ENST00000451332 387 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 AL049714.1-201ENST00000466686 347 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 RPS15AP17-201ENST00000470598 390 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 RPS27P22-201ENST00000478056 241 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 AC098591.2-201ENST00000510152 315 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 AC136628.3-201ENST00000521868 290 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 SULT1C2P1-202ENST00000562418 459 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 HMGN2P15-201ENST00000585707 270 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 AL590095.2-201ENST00000604136 117 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 AC009974.1-201ENST00000608881 455 ntBASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.46□□□□□ -2.34
SMCO4Q9NRQ5 RNU6-750P-201ENST00000390946 107 ntBASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 TPMTP3-201ENST00000411928 735 ntBASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 RPL31P3-201ENST00000458430 332 ntBASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 RPS26P55-201ENST00000471178 356 ntBASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 AC008562.1-201ENST00000521763 330 ntBASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 AP003484.1-201ENST00000530974 250 ntBASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 AP001004.1-201ENST00000582468 324 ntBASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 AC079791.1-201ENST00000605356 973 ntBASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 AC108706.1-201ENST00000611053 297 ntBASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 AL589743.7-201ENST00000612637 233 ntBASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 U1.36-201ENST00000620684 176 ntBASIC0.45□□□□□ -2.34
SMCO4Q9NRQ5 RBBP8P1-201ENST00000449447 1844 ntBASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 RNU4-62P-201ENST00000410125 130 ntBASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 USP9YP33-201ENST00000412220 421 ntBASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 AL591043.1-201ENST00000432461 424 ntBASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 RPS20P20-201ENST00000460498 340 ntBASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 AL391261.3-201ENST00000557194 520 ntBASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 BNIP3P10-201ENST00000605360 577 ntBASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 AC087045.1-201ENST00000605856 382 ntBASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 MIR6835-201ENST00000621552 64 ntBASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.44□□□□□ -2.34
SMCO4Q9NRQ5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 RNU6-968P-201ENST00000384076 107 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 DSTNP4-201ENST00000399472 474 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 MTATP6P31-201ENST00000406985 692 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 RNU2-49P-201ENST00000410666 184 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 RPS27P16-201ENST00000425758 201 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 DDX3P2-201ENST00000446138 111 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 AL035666.1-201ENST00000446195 348 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 RPL26P9-201ENST00000457466 433 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 COX6CP14-201ENST00000469580 174 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 AP001025.1-201ENST00000486139 332 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 AC098799.1-201ENST00000504752 800 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 AC008494.2-201ENST00000514544 370 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 SNORD116-28-201ENST00000516123 91 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 COX6B1P6-201ENST00000522347 255 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 AC026271.5-201ENST00000577873 130 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 VN1R107P-201ENST00000601784 209 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 AC098826.3-201ENST00000603823 466 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 AC010900.2-201ENST00000604508 210 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 AC008498.1-201ENST00000613012 531 ntBASIC0.43□□□□□ -2.34
SMCO4Q9NRQ5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 RNU1-17P-201ENST00000363022 152 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 RNU6-76P-201ENST00000384060 104 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 MIR506-201ENST00000384998 124 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 USP9YP26-201ENST00000421008 661 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 OOSP1P1-201ENST00000423265 274 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 USP9YP18-201ENST00000425912 695 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 USP9YP24-201ENST00000434374 697 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 USP9YP17-201ENST00000444617 696 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms