Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 NDUFB4P7-201ENST00000423198 363 ntBASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 AL356867.1-201ENST00000429623 299 ntBASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 AC112220.1-201ENST00000434628 355 ntBASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 AC010095.1-201ENST00000443543 144 ntBASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 AC100832.1-201ENST00000471945 383 ntBASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 RNU6-1256P-201ENST00000516539 103 ntBASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 AC018448.1-201ENST00000552843 316 ntBASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 AC093535.2-201ENST00000624769 2326 ntBASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 SRP72P2-201ENST00000344851 1979 ntBASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRDM9Q9NQV7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 AL360270.2-201ENST00000562952 5985 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 RN7SKP145-201ENST00000363291 303 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 RNA5SP187-201ENST00000384400 119 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 SNORA66-201ENST00000384792 133 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 RNU2-54P-201ENST00000410299 190 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 RNU4-34P-201ENST00000410431 124 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 RPS12P23-201ENST00000419579 400 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 CYP4F29P-201ENST00000420685 446 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 RNU6-589P-201ENST00000516485 107 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 Y_RNA.712-201ENST00000517011 92 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 RNA5SP291-201ENST00000517222 105 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 AC107016.1-201ENST00000550463 337 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 U7.2-201ENST00000607576 63 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 MIR8080-201ENST00000622224 89 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 AC107027.3-201ENST00000565095 3473 ntBASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
PRDM9Q9NQV7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 RNU6-873P-201ENST00000363833 107 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 RNA5SP234-201ENST00000363916 119 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 SNORD56.6-201ENST00000384569 71 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 RNA5SP31-201ENST00000411144 127 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 RPS26P42-201ENST00000413485 326 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 AC138623.1-201ENST00000418060 216 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 AC079355.1-201ENST00000421770 223 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 TDGF1P1-201ENST00000445734 527 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 RPL21P126-201ENST00000470049 478 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 AC109810.1-201ENST00000534066 224 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 AC090049.2-201ENST00000550377 109 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 LARP7P3-201ENST00000579888 337 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 AC024940.4-201ENST00000605507 246 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 AC091932.3-201ENST00000624223 323 ntBASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms