Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 PAXBP1P1-201ENST00000449315 447 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 AL353705.4-201ENST00000449661 238 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 AC080013.2-201ENST00000460866 323 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 TRBV1-201ENST00000476502 284 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 RNU6-927P-201ENST00000516199 100 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 SNORD19.2-201ENST00000516978 73 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 MTND2P32-201ENST00000521584 1038 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 AC021269.2-201ENST00000532318 330 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 AC007115.1-201ENST00000546853 234 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 MRPS36P5-201ENST00000551909 298 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 MIR4648-201ENST00000580107 72 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 MIR5694-201ENST00000581190 76 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 AL137847.3-201ENST00000611521 109 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 AC011477.1-204ENST00000623416 1325 ntBASIC2.42□□□□□ -2.02
TM9SF3Q9HD45 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 RNA5SP456-201ENST00000364002 114 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 RNU6-744P-201ENST00000365557 107 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 RNU6-1316P-201ENST00000384242 108 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 BX276092.3-201ENST00000424182 230 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AL356320.1-201ENST00000429616 163 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AC084290.1-201ENST00000434995 374 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 HMGB3P12-201ENST00000438745 556 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AC026801.1-201ENST00000497178 464 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 MIR892C-201ENST00000516410 77 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 IGLV3-17-201ENST00000519099 244 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 IGKV3-31-201ENST00000523109 329 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AC121758.2-201ENST00000553271 193 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 MTND4P33-201ENST00000556706 766 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 MIR4765-201ENST00000585007 77 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AL355598.1-201ENST00000604169 202 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AC107952.2-201ENST00000606048 486 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AC046143.2-201ENST00000609789 160 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 AC025048.6-202ENST00000627667 438 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 ADAM3A-203ENST00000461344 2157 ntBASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
TM9SF3Q9HD45 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
TM9SF3Q9HD45 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.4□□□□□ -2.02
TM9SF3Q9HD45 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.4□□□□□ -2.02
TM9SF3Q9HD45 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 OR56A5-201ENST00000340110 738 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 SNORA3A-201ENST00000364113 130 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 RNU2-68P-201ENST00000410878 191 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 MTND2P9-201ENST00000422293 931 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AC107222.1-201ENST00000510899 637 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 SNORA31.6-201ENST00000516241 130 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 RNA5SP281-201ENST00000516504 135 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 EEF1A1P37-201ENST00000522748 715 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AP001372.4-201ENST00000524889 472 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 MTCO2P15-201ENST00000532655 656 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AL158827.2-201ENST00000602494 330 ntBASIC2.4□□□□□ -2.03
TM9SF3Q9HD45 AC098826.3-201ENST00000603823 466 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms