Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.2□□□□□ -1.9
BRF2Q9HAW0 AC092435.3-201ENST00000565538 3654 ntBASIC3.2□□□□□ -1.9
BRF2Q9HAW0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 SNORD115-7-201ENST00000365306 82 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 RNU6-395P-201ENST00000365662 106 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 RNU6-116P-201ENST00000384042 109 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 RNU6-1029P-201ENST00000384109 107 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 Y_RNA.481-201ENST00000384373 102 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 Y_RNA.516-201ENST00000384541 124 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 RNA5SP354-201ENST00000391247 136 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AC068050.1-201ENST00000394891 380 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AL591416.1-201ENST00000404015 867 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AF274854.1-201ENST00000413236 615 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AC245291.1-201ENST00000419501 328 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 MTCO3P30-201ENST00000426425 670 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AC122718.1-201ENST00000439448 744 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 ATP5C1P1-201ENST00000441945 895 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 TRBV1-201ENST00000476502 284 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 RPL36AP51-201ENST00000487216 318 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AC104027.1-201ENST00000521887 300 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 MIR4775-201ENST00000581168 75 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AL138889.2-201ENST00000603883 242 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 uc_338.1-201ENST00000612113 180 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AP001486.3-201ENST00000615334 372 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AL731566.2-201ENST00000618971 317 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 U2.21-201ENST00000637295 81 ntBASIC3.19□□□□□ -1.9
BRF2Q9HAW0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRF2Q9HAW0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 MTND4P35-201ENST00000604257 1375 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 Y_RNA.6-201ENST00000362350 114 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 RNA5SP383-201ENST00000362934 120 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 Y_RNA.381-201ENST00000365666 102 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 RPS4XP8-201ENST00000402039 771 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AL590002.1-201ENST00000406554 418 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 MTND3P21-201ENST00000433774 331 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 CST9LP2-201ENST00000437612 320 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 RPL7P54-201ENST00000438336 674 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 RPL21P133-201ENST00000443666 476 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AL162395.1-201ENST00000457882 422 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 RN7SL542P-201ENST00000467147 294 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 RN7SL442P-201ENST00000473804 320 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AC126182.1-201ENST00000478134 357 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AC009646.1-201ENST00000510455 318 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AL157871.3-201ENST00000557231 293 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AC008521.1-201ENST00000587471 187 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AC012468.1-201ENST00000604888 430 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AC008945.2-201ENST00000606056 604 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AC013562.2-201ENST00000611632 603 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AC024940.5-201ENST00000622889 474 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AC110491.1-201ENST00000562191 2010 ntBASIC3.18□□□□□ -1.9
BRF2Q9HAW0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BRF2Q9HAW0 AP003122.5-201ENST00000527668 3766 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 RNU6-778P-201ENST00000363269 103 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 RNU6-1322P-201ENST00000364309 107 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 RNU6-805P-201ENST00000365643 106 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 UBE2V1P2-201ENST00000397758 440 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 CALM2P3-201ENST00000400429 449 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 RPS29P4-201ENST00000414733 161 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 RPS15AP6-201ENST00000420703 385 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AL353193.1-201ENST00000421444 268 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 AL365496.1-201ENST00000426885 215 ntBASIC3.17□□□□□ -1.9
BRF2Q9HAW0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms