Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 Y_RNA.577-201ENST00000384794 101 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 MIR3065-201ENST00000390137 79 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 MIR1302-6-201ENST00000408466 90 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 MIR1911-201ENST00000410783 80 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 RNU2-38P-201ENST00000410856 79 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 AL030996.1-201ENST00000411430 235 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 AC063979.1-201ENST00000415539 377 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 ELOCP20-201ENST00000422460 345 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 CKS1BP5-201ENST00000434172 273 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 MTCO3P8-201ENST00000453691 755 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 SNORD127-201ENST00000458892 86 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 FTH1P2-201ENST00000466086 412 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 RPL35AP15-201ENST00000468042 339 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 RPL31P60-201ENST00000478450 367 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 AC069499.1-201ENST00000489433 509 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 GMPSP1-201ENST00000514075 579 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 SNORA31.3-201ENST00000516029 96 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 RNU6-397P-201ENST00000516226 104 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 SNORA31.22-201ENST00000517204 135 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 HSPE1P20-201ENST00000538133 289 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 AC006600.1-201ENST00000572529 153 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 U73479.1-201ENST00000618062 168 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 MIR6891-201ENST00000618788 93 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 AC103858.2-201ENST00000621471 543 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 MIR6810-201ENST00000622701 70 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 PRO1804-201ENST00000623780 2050 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 SAGE2P-201ENST00000420011 2126 ntBASIC3.88□□□□□ -1.79
SEC61A2Q9H9S3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 Y_RNA.60-201ENST00000362831 98 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 RNY1P16-201ENST00000363063 111 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 SNORA70E-201ENST00000384492 135 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 MIR513A2-201ENST00000385249 127 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 RNU6-174P-201ENST00000410406 106 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 SNORA74C-2-201ENST00000411179 201 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 RAC1P3-201ENST00000416129 580 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 RPS15AP6-201ENST00000420703 385 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 PGBD4P6-201ENST00000421501 610 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 AL356387.2-201ENST00000422272 243 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 AL451062.2-201ENST00000427515 271 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 AL132765.1-201ENST00000434165 553 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 RPS20P1-201ENST00000434853 354 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 AL590399.6-201ENST00000446396 307 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 AC011276.1-201ENST00000469688 323 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 RN7SL481P-201ENST00000477764 299 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 AC006499.6-201ENST00000511169 607 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 AC007991.1-201ENST00000522680 631 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 BNIP3P5-201ENST00000562290 498 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 MIR548AC-201ENST00000585049 88 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 RAC1P9-201ENST00000604990 392 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 AC004805.2-201ENST00000605382 482 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 MIR3976-201ENST00000606807 139 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 MIR1244-1-201ENST00000612829 85 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 AC005344.1-201ENST00000613391 459 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 MIR1244-3-201ENST00000635744 85 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 MIR1244-2-201ENST00000636449 85 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 MIR1244-4-202ENST00000636813 85 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 AC011266.1-201ENST00000624119 3569 ntBASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.87□□□□□ -1.79
SEC61A2Q9H9S3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms