Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.37□□□□□ -1.71
BCAS3Q9H6U6 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.37□□□□□ -1.71
BCAS3Q9H6U6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.37□□□□□ -1.71
BCAS3Q9H6U6 AL589994.2-201ENST00000621124 579 ntBASIC4.37□□□□□ -1.71
BCAS3Q9H6U6 MIR4496-201ENST00000635896 61 ntBASIC4.37□□□□□ -1.71
BCAS3Q9H6U6 MIR4275-201ENST00000636486 87 ntBASIC4.37□□□□□ -1.71
BCAS3Q9H6U6 DDX18P3-201ENST00000404856 2007 ntBASIC4.37□□□□□ -1.71
BCAS3Q9H6U6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
BCAS3Q9H6U6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
BCAS3Q9H6U6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BCAS3Q9H6U6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BCAS3Q9H6U6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 LINC01109-201ENST00000603837 3081 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 MT-TC-201ENST00000387405 66 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 NDUFS5P1-201ENST00000405668 289 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 SNORA3C-201ENST00000408792 125 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 RPL31P60-201ENST00000478450 367 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 RNU1-95P-201ENST00000516357 160 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 RNU1-128P-201ENST00000516704 160 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 RNU6-307P-201ENST00000516743 106 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 AC005899.2-201ENST00000584353 90 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 AC104763.2-201ENST00000604179 382 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 AL670379.4-201ENST00000605279 254 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 AC107871.2-201ENST00000612894 502 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 AC004696.1-201ENST00000614345 607 ntBASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
BCAS3Q9H6U6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 HSPA8P4-201ENST00000511877 1920 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 Y_RNA.428-201ENST00000384078 102 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 MIR483-201ENST00000385070 76 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AC110754.1-201ENST00000399740 601 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AL590632.1-201ENST00000424289 371 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AC091286.1-201ENST00000431233 461 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AC234775.1-201ENST00000454247 670 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AC087884.1-201ENST00000469738 328 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AC092451.1-201ENST00000480211 153 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 HIGD1AP3-201ENST00000515857 278 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 SNORD116-26-201ENST00000516006 96 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 SNORA31.3-201ENST00000516029 96 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 RNU6-1332P-201ENST00000516666 104 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 SNORD116.3-201ENST00000517176 78 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AF186190.1-201ENST00000517470 480 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AC026371.1-201ENST00000551867 419 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AC011494.1-201ENST00000596454 237 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AC243312.2-201ENST00000623340 601 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AL732372.2-225ENST00000642124 456 ntBASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BCAS3Q9H6U6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 RHOT1P2-201ENST00000366423 333 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 RNU6-701P-201ENST00000384059 107 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 MIR93-201ENST00000385024 80 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 RNU6-1109P-201ENST00000391187 107 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 RNU6-293P-201ENST00000411259 106 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 CYCSP10-201ENST00000417973 294 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 AC243428.1-201ENST00000421099 264 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 HMGB1P37-201ENST00000439613 609 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 AC104472.2-201ENST00000469035 601 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 AC096745.1-201ENST00000509945 370 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms