Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC110760.3-202ENST00000515177 371 ntBASIC2.71□□□□□ -1.98
RPAP3Q9H6T3 HMGB1P41-201ENST00000520234 440 ntBASIC2.71□□□□□ -1.98
RPAP3Q9H6T3 ATP5F1P5-201ENST00000526403 760 ntBASIC2.71□□□□□ -1.98
RPAP3Q9H6T3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.71□□□□□ -1.98
RPAP3Q9H6T3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.71□□□□□ -1.98
RPAP3Q9H6T3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.71□□□□□ -1.98
RPAP3Q9H6T3 MTND4LP5-201ENST00000605152 292 ntBASIC2.71□□□□□ -1.98
RPAP3Q9H6T3 AC067747.1-201ENST00000608026 250 ntBASIC2.71□□□□□ -1.98
RPAP3Q9H6T3 AC107214.2-201ENST00000608204 634 ntBASIC2.71□□□□□ -1.98
RPAP3Q9H6T3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RPAP3Q9H6T3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.71□□□□□ -1.98
RPAP3Q9H6T3 MTND1P37-201ENST00000636562 264 ntBASIC2.71□□□□□ -1.98
RPAP3Q9H6T3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RPAP3Q9H6T3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 AL391994.1-201ENST00000254724 282 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 RNU6-1214P-201ENST00000363650 109 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 RNU6-660P-201ENST00000364566 109 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 Y_RNA.302-201ENST00000364997 102 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 RPL21P24-201ENST00000413752 448 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 VPS26BP1-201ENST00000417155 755 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 MTCO3P30-201ENST00000426425 670 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 AL354941.1-201ENST00000438600 464 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 AL049734.2-201ENST00000441066 616 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 COX6CP12-201ENST00000446748 202 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 RPS20P22-201ENST00000473700 357 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 AC090096.1-201ENST00000489168 390 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 BTF3P12-201ENST00000519620 469 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 EEF1A1P37-201ENST00000522748 715 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 AC007038.2-201ENST00000608095 740 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 MIR6895-201ENST00000613497 78 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 AC021755.4-201ENST00000616620 456 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 AP003399.1-201ENST00000637534 361 ntBASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPAP3Q9H6T3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 CCT4P2-201ENST00000233836 1548 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 RNU6-217P-201ENST00000384164 104 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 RNU4-26P-201ENST00000410270 107 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 RNU2-33P-201ENST00000410344 192 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC010153.1-201ENST00000432862 727 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 LARP1BP3-201ENST00000437229 869 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AL606662.1-201ENST00000445763 553 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 LINC00888-204ENST00000487386 421 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC055855.1-201ENST00000489563 579 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 RPS29P20-201ENST00000489592 171 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 RPL9P6-201ENST00000492764 598 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 EIF4EP3-201ENST00000498782 656 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 MRPS36P2-201ENST00000512569 299 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 RN7SKP265-201ENST00000516448 223 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC121758.2-201ENST00000553271 193 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC090888.2-201ENST00000559765 1144 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC234772.3-201ENST00000602277 528 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AL161729.4-201ENST00000604650 476 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC091965.4-201ENST00000607691 587 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC004908.2-201ENST00000609090 574 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AL031667.3-201ENST00000620124 655 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 MIR6873-201ENST00000622788 63 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC007490.1-201ENST00000624321 703 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC092192.1-201ENST00000633154 1018 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 CU459211.1-201ENST00000635667 749 ntBASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.69□□□□□ -1.98
RPAP3Q9H6T3 OR56A5-201ENST00000340110 738 ntBASIC2.68□□□□□ -1.98
RPAP3Q9H6T3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RPAP3Q9H6T3 Y_RNA.18-201ENST00000362461 102 ntBASIC2.68□□□□□ -1.98
RPAP3Q9H6T3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.68□□□□□ -1.98
RPAP3Q9H6T3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.68□□□□□ -1.98
RPAP3Q9H6T3 RPS15AP28-201ENST00000435088 386 ntBASIC2.68□□□□□ -1.98
RPAP3Q9H6T3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.68□□□□□ -1.98
RPAP3Q9H6T3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.68□□□□□ -1.98
RPAP3Q9H6T3 RPS12P2-201ENST00000439728 269 ntBASIC2.68□□□□□ -1.98
RPAP3Q9H6T3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.68□□□□□ -1.98
RPAP3Q9H6T3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.68□□□□□ -1.98
RPAP3Q9H6T3 MTCYBP3-201ENST00000445588 1137 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms