Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MAPK10-263ENST00000641052 4307 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 RNA5SP447-201ENST00000363749 119 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 RNU6-827P-201ENST00000365553 106 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 RNU6-76P-201ENST00000384060 104 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 Y_RNA.525-201ENST00000384570 113 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 RNU6-882P-201ENST00000391025 103 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 AL590762.2-201ENST00000395798 571 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 RN7SKP284-201ENST00000411002 343 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 SNORD56-201ENST00000413522 71 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 AC063979.1-201ENST00000415539 377 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 DDX39BP1-205ENST00000422507 192 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 AL138785.1-201ENST00000425821 331 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 AC138761.5-201ENST00000433967 325 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 POLR2KP2-201ENST00000438155 177 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 AC090804.1-201ENST00000448870 490 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 MTATP6P7-201ENST00000453315 681 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 RNU7-197P-201ENST00000458836 62 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 DUTP1-201ENST00000493631 470 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 HMGB3P16-201ENST00000508037 287 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 SNORA40.9-201ENST00000515895 93 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 RN7SKP179-201ENST00000516126 217 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 RN7SKP260-201ENST00000516907 149 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 AC023043.3-201ENST00000593113 385 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 KLKP1-201ENST00000595979 403 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 AC006115.2-201ENST00000596823 202 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 AC008814.1-201ENST00000603797 406 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 MIR3658-201ENST00000636291 56 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 MAPK10-338ENST00000641647 3362 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 NCAPGP1-201ENST00000505112 1814 ntBASIC5□□□□□ -1.61
CNTNAP3Q9BZ76 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 AC073136.1-201ENST00000449426 2884 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 AL138820.1-201ENST00000617901 5305 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 Y_RNA.172-201ENST00000363765 102 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 SNORD73B-201ENST00000364394 72 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 MIR483-201ENST00000385070 76 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 MIR105-1-201ENST00000385222 81 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 SNORA40.19-201ENST00000390846 128 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 LAP3P1-201ENST00000403648 294 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 Z82188.1-201ENST00000436709 154 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 USP9YP7-201ENST00000436723 430 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 USP9YP32-201ENST00000452432 430 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 RNU7-107P-201ENST00000459121 61 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 AC117440.1-201ENST00000474107 571 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 AC012158.1-204ENST00000483430 465 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 AC008694.2-201ENST00000517591 306 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 MIR4431-201ENST00000579990 94 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 SNORD84-203ENST00000584275 78 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 AC073869.8-201ENST00000641806 335 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 AC022893.2-201ENST00000564832 3296 ntBASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
CNTNAP3Q9BZ76 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 STX3-208ENST00000641815 3236 ntBASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 RNA5SP52-201ENST00000362448 134 ntBASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 RNA5SP197-201ENST00000363357 119 ntBASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 RNA5SP428-201ENST00000365129 132 ntBASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 RNU6-741P-201ENST00000383889 107 ntBASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 RNA5SP187-201ENST00000384400 119 ntBASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 RNA5SP213-201ENST00000391031 106 ntBASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 GNG5P5-201ENST00000420444 220 ntBASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 AC063976.4-201ENST00000421971 163 ntBASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 RPL23AP1-201ENST00000428990 471 ntBASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 WARS2P1-201ENST00000429678 537 ntBASIC4.98□□□□□ -1.61
CNTNAP3Q9BZ76 RPS15AP7-201ENST00000439294 405 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms