Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC020895.1-201ENST00000595362 272 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 AC024153.1-201ENST00000603103 365 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 AL590392.1-201ENST00000604960 446 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 AC007742.2-201ENST00000618226 398 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 MAPK10-286ENST00000641208 8747 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 MTND4P23-201ENST00000447723 1363 ntBASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TRAIPQ9BWF2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
TRAIPQ9BWF2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5□□□□□ -1.61
TRAIPQ9BWF2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRAIPQ9BWF2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRAIPQ9BWF2 RNU1-94P-201ENST00000362627 173 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 RNA5SP509-201ENST00000364577 119 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 RNU6-1227P-201ENST00000383981 107 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 AL117339.3-201ENST00000418733 162 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5□□□□□ -1.61
TRAIPQ9BWF2 Z82205.1-201ENST00000428456 297 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5□□□□□ -1.61
TRAIPQ9BWF2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5□□□□□ -1.61
TRAIPQ9BWF2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5□□□□□ -1.61
TRAIPQ9BWF2 ISCUP1-201ENST00000454451 448 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5□□□□□ -1.61
TRAIPQ9BWF2 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 SNORA70.14-201ENST00000516205 110 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 SNORA43.2-201ENST00000516652 128 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 CBX3P7-201ENST00000532876 502 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 MIR4474-201ENST00000579189 78 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5□□□□□ -1.61
TRAIPQ9BWF2 RN7SL176P-201ENST00000580352 264 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 AC098657.3-201ENST00000620434 263 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
TRAIPQ9BWF2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5□□□□□ -1.61
TRAIPQ9BWF2 AL158163.1-201ENST00000603915 1649 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
TRAIPQ9BWF2 AC233263.6-201ENST00000631132 1963 ntBASIC5□□□□□ -1.61
TRAIPQ9BWF2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 RNU6-1317P-201ENST00000364582 104 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 MIR521-1-201ENST00000384902 87 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 SYF2P2-201ENST00000417620 583 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 AF228730.4-201ENST00000421457 183 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 RPL7AP25-201ENST00000423357 805 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 USMG5P1-201ENST00000425964 177 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 AC005300.1-201ENST00000428401 373 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 HMGN2P10-201ENST00000448085 265 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 ELOCP24-201ENST00000456370 334 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 RNU7-23P-201ENST00000459465 62 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 RPL23AP14-201ENST00000468281 468 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 AC011276.1-201ENST00000469688 323 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 AC034236.1-201ENST00000469891 373 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 AC097473.1-201ENST00000508142 408 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 AC093840.1-201ENST00000511599 336 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 Y_RNA.670-201ENST00000516255 105 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 AC021739.1-201ENST00000559631 174 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 AC011890.2-201ENST00000613393 294 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 FP236240.3-201ENST00000623061 327 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 MIR6830-201ENST00000636015 70 ntBASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
TRAIPQ9BWF2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 RNA5SP515-201ENST00000364570 118 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 RNU6-310P-201ENST00000384655 107 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 MIR659-201ENST00000384963 97 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 MIR518D-201ENST00000385014 87 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 AC087650.1-201ENST00000431445 468 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 RNU7-152P-201ENST00000458982 64 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 HMGN2P13-201ENST00000476476 274 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 RPL7P42-201ENST00000481005 679 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 RN7SL810P-201ENST00000493031 276 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 VWA8P1-201ENST00000510889 176 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 RNU6-264P-201ENST00000517134 104 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 AC109446.1-201ENST00000566172 220 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 MIR6716-201ENST00000613413 80 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 AC004944.1-201ENST00000517807 3059 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms