Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
FOXC2Q99958 AC104454.1-201ENST00000421341 1401 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
FOXC2Q99958 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
FOXC2Q99958 SNORA4.1-201ENST00000364263 144 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 SNORD114-30-201ENST00000364448 72 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 NDUFS5P4-201ENST00000412983 318 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.12□□□□□ -2.07
FOXC2Q99958 SEPT2P1-201ENST00000419651 180 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 USP9YP26-201ENST00000421008 661 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.12□□□□□ -2.07
FOXC2Q99958 MTCO3P30-201ENST00000426425 670 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.12□□□□□ -2.07
FOXC2Q99958 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.12□□□□□ -2.07
FOXC2Q99958 SNRPEP9-201ENST00000436794 238 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 RPS29P6-201ENST00000438196 145 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.12□□□□□ -2.07
FOXC2Q99958 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.12□□□□□ -2.07
FOXC2Q99958 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.12□□□□□ -2.07
FOXC2Q99958 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.12□□□□□ -2.07
FOXC2Q99958 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.12□□□□□ -2.07
FOXC2Q99958 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.12□□□□□ -2.07
FOXC2Q99958 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
FOXC2Q99958 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
FOXC2Q99958 AC234781.5-201ENST00000508429 271 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 AC098591.2-201ENST00000510152 315 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 AC107222.1-201ENST00000510899 637 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 RN7SKP287-201ENST00000516546 266 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.12□□□□□ -2.07
FOXC2Q99958 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.12□□□□□ -2.07
FOXC2Q99958 NACAP3-201ENST00000552100 481 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.12□□□□□ -2.07
FOXC2Q99958 AC023824.2-201ENST00000566185 400 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 AL354943.1-201ENST00000572103 781 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 AC009163.5-201ENST00000575421 637 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 MIR4446-201ENST00000578505 67 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.12□□□□□ -2.07
FOXC2Q99958 AC022022.2-201ENST00000602989 360 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 AC021171.1-201ENST00000603137 706 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 AP000787.2-201ENST00000604432 568 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 AC104237.2-201ENST00000612456 443 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 AC021755.4-201ENST00000616620 456 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
FOXC2Q99958 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.12□□□□□ -2.07
FOXC2Q99958 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.12□□□□□ -2.07
FOXC2Q99958 ADAM3A-203ENST00000461344 2157 ntBASIC2.12□□□□□ -2.07
FOXC2Q99958 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
FOXC2Q99958 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
FOXC2Q99958 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
FOXC2Q99958 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
FOXC2Q99958 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
FOXC2Q99958 RNA5SP393-201ENST00000363423 117 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
FOXC2Q99958 RNU6-1328P-201ENST00000410938 106 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXC2Q99958 ELOCP14-201ENST00000428070 331 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 SUMO1P4-201ENST00000429430 302 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 ELOCP7-201ENST00000439968 331 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AC098831.1-201ENST00000440661 216 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AC011816.1-201ENST00000441346 546 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.11□□□□□ -2.07
FOXC2Q99958 TPT1P14-201ENST00000448018 505 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AP000705.1-201ENST00000454567 350 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 ANKRD26P4-201ENST00000455755 950 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXC2Q99958 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.11□□□□□ -2.07
FOXC2Q99958 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXC2Q99958 AC090096.1-201ENST00000489168 390 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AC034222.1-201ENST00000494052 532 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.11□□□□□ -2.07
FOXC2Q99958 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.11□□□□□ -2.07
FOXC2Q99958 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXC2Q99958 RN7SKP219-201ENST00000516825 296 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 RNA5SP290-201ENST00000517133 127 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 HSPE1P18-201ENST00000517602 280 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXC2Q99958 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.11□□□□□ -2.07
FOXC2Q99958 AP000857.1-201ENST00000532151 543 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AC004486.1-201ENST00000546846 233 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.11□□□□□ -2.07
FOXC2Q99958 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXC2Q99958 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXC2Q99958 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.11□□□□□ -2.07
FOXC2Q99958 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXC2Q99958 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.11□□□□□ -2.07
FOXC2Q99958 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXC2Q99958 AC060771.1-201ENST00000582031 164 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AC009977.1-201ENST00000586015 570 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.11□□□□□ -2.07
FOXC2Q99958 UBE2L4-201ENST00000587688 464 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AC093424.1-201ENST00000604999 338 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AC004805.2-201ENST00000605382 482 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AL158801.5-201ENST00000623123 465 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.11□□□□□ -2.07
FOXC2Q99958 PCMTD1P7-201ENST00000634506 357 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 AC110994.2-201ENST00000635481 492 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 U2.21-201ENST00000637295 81 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
FOXC2Q99958 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms