Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TIMP4Q99727 Y_RNA.148-201ENST00000363557 117 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 RNU6-196P-201ENST00000384315 107 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 RNU6-434P-201ENST00000384376 107 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 MIR554-201ENST00000384874 96 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 MIR153-1-201ENST00000384914 90 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 SNORA48.7-201ENST00000391302 135 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 AL360182.1-201ENST00000397433 468 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 AC110754.1-201ENST00000399740 601 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 AL391417.1-201ENST00000404100 426 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 RNU6-712P-201ENST00000410558 100 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 CYCSP19-201ENST00000411715 316 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.58□□□□□ -1.84
TIMP4Q99727 AL358176.2-201ENST00000425769 204 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.58□□□□□ -1.84
TIMP4Q99727 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.58□□□□□ -1.84
TIMP4Q99727 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TIMP4Q99727 RPL23AP33-201ENST00000442301 452 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.58□□□□□ -1.84
TIMP4Q99727 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 AL590399.6-201ENST00000446396 307 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 RNU7-167P-201ENST00000459160 62 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 SNORA84-201ENST00000459229 133 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TIMP4Q99727 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TIMP4Q99727 RNU2-69P-201ENST00000516061 100 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 SNORA14.1-201ENST00000516113 141 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.58□□□□□ -1.84
TIMP4Q99727 RNU6-323P-201ENST00000521915 107 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.58□□□□□ -1.84
TIMP4Q99727 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
TIMP4Q99727 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.58□□□□□ -1.84
TIMP4Q99727 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.58□□□□□ -1.84
TIMP4Q99727 AC025946.2-201ENST00000603398 234 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 AC083806.3-201ENST00000614016 455 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 MIR6130-201ENST00000619419 109 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.58□□□□□ -1.84
TIMP4Q99727 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.58□□□□□ -1.84
TIMP4Q99727 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.58□□□□□ -1.84
TIMP4Q99727 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TIMP4Q99727 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TIMP4Q99727 KPNA2P1-201ENST00000458289 1591 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TIMP4Q99727 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
TIMP4Q99727 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.58□□□□□ -1.84
TIMP4Q99727 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TIMP4Q99727 HSPA8P4-201ENST00000511877 1920 ntBASIC3.58□□□□□ -1.84
TIMP4Q99727 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.57□□□□□ -1.84
TIMP4Q99727 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
TIMP4Q99727 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TIMP4Q99727 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TIMP4Q99727 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TIMP4Q99727 Y_RNA.5-201ENST00000362334 102 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 RNU1-18P-201ENST00000363062 164 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 Y_RNA.112-201ENST00000363250 102 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 RNA5SP399-201ENST00000364003 117 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 SNORA75B-201ENST00000384053 137 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 RNU6-190P-201ENST00000384154 102 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 MIR3074-201ENST00000384885 81 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 RPS12P24-201ENST00000412619 387 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.57□□□□□ -1.84
TIMP4Q99727 RPLP0P7-201ENST00000416050 667 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.57□□□□□ -1.84
TIMP4Q99727 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.57□□□□□ -1.84
TIMP4Q99727 AC090774.1-201ENST00000435925 246 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.57□□□□□ -1.84
TIMP4Q99727 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.57□□□□□ -1.84
TIMP4Q99727 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.57□□□□□ -1.84
TIMP4Q99727 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.57□□□□□ -1.84
TIMP4Q99727 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.57□□□□□ -1.84
TIMP4Q99727 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.57□□□□□ -1.84
TIMP4Q99727 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.57□□□□□ -1.84
TIMP4Q99727 RN7SL542P-201ENST00000467147 294 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.57□□□□□ -1.84
TIMP4Q99727 AC117503.1-201ENST00000472241 394 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.57□□□□□ -1.84
TIMP4Q99727 AC079140.5-201ENST00000507882 310 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 AC026726.1-201ENST00000512859 601 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 Y_RNA.661-201ENST00000516003 99 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 Vault.1-201ENST00000516474 102 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 MIR2114-201ENST00000516645 80 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 RN7SKP60-201ENST00000516985 239 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 RNU6-840P-201ENST00000517275 65 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.57□□□□□ -1.84
TIMP4Q99727 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.57□□□□□ -1.84
TIMP4Q99727 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.57□□□□□ -1.84
TIMP4Q99727 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.57□□□□□ -1.84
TIMP4Q99727 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.57□□□□□ -1.84
TIMP4Q99727 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.57□□□□□ -1.84
TIMP4Q99727 OR4H12P-201ENST00000556269 907 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 AC104763.2-201ENST00000604179 382 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 AL359547.2-201ENST00000615810 418 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 LINC02471-203ENST00000641941 4752 ntBASIC3.57□□□□□ -1.84
TIMP4Q99727 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
TIMP4Q99727 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
TIMP4Q99727 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TIMP4Q99727 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
TIMP4Q99727 RNU6-1155P-201ENST00000363554 107 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 Y_RNA.399-201ENST00000383955 105 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 RNU6-1040P-201ENST00000383974 107 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms