Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 uc_338.32-201ENST00000615087 172 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC103705.1-201ENST00000619013 241 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 ZNF72P-201ENST00000425869 1908 ntBASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CDK5RAP1Q96SZ6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 MTCO1P24-201ENST00000515438 1558 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-874P-201ENST00000362390 105 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 SNORD3E-201ENST00000362899 217 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 Y_RNA.106-201ENST00000363189 100 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 RNA5SP399-201ENST00000364003 117 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-1226P-201ENST00000384317 107 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-1127P-201ENST00000384580 107 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-550P-201ENST00000391057 101 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AL136372.1-201ENST00000403060 228 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU2-38P-201ENST00000410856 79 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 RPL30P2-201ENST00000414021 291 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 HIGD1AP11-201ENST00000438361 280 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AC083863.1-201ENST00000438811 231 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 HMGB3P30-201ENST00000457863 606 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AC026402.1-201ENST00000513642 170 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 RNY3P15-201ENST00000516297 97 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 Y_RNA.708-201ENST00000516950 96 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AP000889.1-201ENST00000530968 660 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 YPEL5P3-201ENST00000547227 352 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 RN7SL703P-201ENST00000578485 302 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 MIR5692C1-201ENST00000585309 91 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AC018462.2-201ENST00000605375 395 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 RNA5SP108-201ENST00000605921 117 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 MIR8062-201ENST00000621515 85 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AL354798.1-201ENST00000622505 329 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AC243312.2-201ENST00000623340 601 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AC034229.5-201ENST00000624258 185 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AC018555.1-201ENST00000567548 1980 ntBASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDK5RAP1Q96SZ6 AC027287.1-201ENST00000553115 1453 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 Y_RNA.483-201ENST00000384380 101 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 Y_RNA.552-201ENST00000384665 112 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AL356968.1-201ENST00000416622 474 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 RPS15AP10-201ENST00000432472 382 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 ELOCP18-201ENST00000434209 337 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 UBE2V1P13-201ENST00000436983 439 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AC105402.2-201ENST00000438503 358 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 HMGB1P37-201ENST00000439613 609 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AC117503.1-201ENST00000472241 394 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AC087385.1-201ENST00000475062 312 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 PPIAP15-201ENST00000479662 484 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AC114801.2-201ENST00000503825 781 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 Vault.1-201ENST00000516474 102 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 RNA5SP164-201ENST00000516533 110 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-1332P-201ENST00000516666 104 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-64P-201ENST00000517119 105 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 GNRHR2P1-201ENST00000555315 631 ntBASIC4.11□□□□□ -1.75
CDK5RAP1Q96SZ6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms