Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNA5SP450-201ENST00000411206 102 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 RPS15AP38-201ENST00000413110 372 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 RPL36P19-201ENST00000430744 301 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 RPL7P34-201ENST00000433316 712 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 snoU13.28-201ENST00000459235 104 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC005410.1-202ENST00000460347 485 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 RPL31P58-201ENST00000469001 379 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC091965.2-201ENST00000512324 613 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 AP003072.2-201ENST00000527756 676 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 MTCYBP23-201ENST00000558717 1102 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 MIR4711-201ENST00000578274 70 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.43□□□□□ -2.18
IFT140Q96RY7 AC005034.5-201ENST00000604219 466 ntBASIC1.43□□□□□ -2.18
IFT140Q96RY7 AL513185.3-201ENST00000433335 1300 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 MTND4P8-201ENST00000514997 1362 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.42□□□□□ -2.18
IFT140Q96RY7 RNU6-989P-201ENST00000362756 107 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
IFT140Q96RY7 RNU6-339P-201ENST00000384310 107 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 MIR767-201ENST00000390228 109 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 RNU6-920P-201ENST00000410926 92 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 AL133384.1-201ENST00000412744 351 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 HMGB3P31-201ENST00000413333 595 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 AC244636.1-201ENST00000421152 228 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.42□□□□□ -2.18
IFT140Q96RY7 CR848007.2-201ENST00000424918 787 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.42□□□□□ -2.18
IFT140Q96RY7 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.42□□□□□ -2.18
IFT140Q96RY7 HMGN2P10-201ENST00000448085 265 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.42□□□□□ -2.18
IFT140Q96RY7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.42□□□□□ -2.18
IFT140Q96RY7 AC093752.1-206ENST00000511823 336 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 MRPS36P2-201ENST00000512569 299 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 RN7SKP179-201ENST00000516126 217 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 SNORD116-30-201ENST00000516468 85 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 RNU7-193P-201ENST00000516723 65 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 AC092470.1-201ENST00000546187 132 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 AC074029.2-201ENST00000551045 634 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 AC012254.4-201ENST00000588843 273 ntBASIC1.42□□□□□ -2.18
IFT140Q96RY7 AC016716.1-201ENST00000265882 708 ntBASIC1.41□□□□□ -2.18
IFT140Q96RY7 RNU6-716P-201ENST00000365621 103 ntBASIC1.41□□□□□ -2.18
IFT140Q96RY7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.41□□□□□ -2.18
IFT140Q96RY7 AC018437.1-201ENST00000492214 406 ntBASIC1.41□□□□□ -2.18
IFT140Q96RY7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.41□□□□□ -2.18
IFT140Q96RY7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.41□□□□□ -2.18
IFT140Q96RY7 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.41□□□□□ -2.18
IFT140Q96RY7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.41□□□□□ -2.18
IFT140Q96RY7 MED28P6-201ENST00000558776 231 ntBASIC1.41□□□□□ -2.18
IFT140Q96RY7 MIR3616-201ENST00000584070 92 ntBASIC1.41□□□□□ -2.18
IFT140Q96RY7 HMGB1P51-201ENST00000605166 638 ntBASIC1.41□□□□□ -2.18
IFT140Q96RY7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
IFT140Q96RY7 AC004852.3-201ENST00000614131 326 ntBASIC1.41□□□□□ -2.18
IFT140Q96RY7 AC027309.3-201ENST00000623419 351 ntBASIC1.41□□□□□ -2.18
IFT140Q96RY7 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.41□□□□□ -2.18
IFT140Q96RY7 AL137003.2-201ENST00000606924 2538 ntBASIC1.41□□□□□ -2.18
IFT140Q96RY7 SDAD1P2-201ENST00000441308 2028 ntBASIC1.4□□□□□ -2.18
IFT140Q96RY7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.4□□□□□ -2.18
IFT140Q96RY7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
IFT140Q96RY7 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
IFT140Q96RY7 MIR1303-201ENST00000408625 86 ntBASIC1.4□□□□□ -2.19
IFT140Q96RY7 AC092648.1-201ENST00000425870 423 ntBASIC1.4□□□□□ -2.19
IFT140Q96RY7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.4□□□□□ -2.19
IFT140Q96RY7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.4□□□□□ -2.19
IFT140Q96RY7 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
IFT140Q96RY7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.4□□□□□ -2.19
IFT140Q96RY7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.4□□□□□ -2.19
IFT140Q96RY7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
IFT140Q96RY7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.4□□□□□ -2.19
IFT140Q96RY7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.4□□□□□ -2.19
IFT140Q96RY7 AC023158.1-201ENST00000561632 1025 ntBASIC1.4□□□□□ -2.19
IFT140Q96RY7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.4□□□□□ -2.19
IFT140Q96RY7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.4□□□□□ -2.19
IFT140Q96RY7 AC013468.1-201ENST00000608680 598 ntBASIC1.4□□□□□ -2.19
IFT140Q96RY7 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.4□□□□□ -2.19
IFT140Q96RY7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.4□□□□□ -2.19
IFT140Q96RY7 MIR7515-201ENST00000637837 67 ntBASIC1.4□□□□□ -2.19
IFT140Q96RY7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
IFT140Q96RY7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.4□□□□□ -2.19
IFT140Q96RY7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
IFT140Q96RY7 RNU6-98P-201ENST00000384173 107 ntBASIC1.39□□□□□ -2.19
IFT140Q96RY7 SSXP10-201ENST00000402595 565 ntBASIC1.39□□□□□ -2.19
IFT140Q96RY7 RNU6-712P-201ENST00000410558 100 ntBASIC1.39□□□□□ -2.19
IFT140Q96RY7 AC018630.2-202ENST00000422992 927 ntBASIC1.39□□□□□ -2.19
IFT140Q96RY7 RPS29P28-201ENST00000446439 141 ntBASIC1.39□□□□□ -2.19
IFT140Q96RY7 AL500527.1-201ENST00000448532 255 ntBASIC1.39□□□□□ -2.19
IFT140Q96RY7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.39□□□□□ -2.19
IFT140Q96RY7 AC087588.1-201ENST00000462203 316 ntBASIC1.39□□□□□ -2.19
IFT140Q96RY7 AC087884.1-201ENST00000469738 328 ntBASIC1.39□□□□□ -2.19
IFT140Q96RY7 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.39□□□□□ -2.19
IFT140Q96RY7 PCNAP1-201ENST00000505363 709 ntBASIC1.39□□□□□ -2.19
IFT140Q96RY7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms