Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
CSMD1Q96PZ7 OR9R1P-201ENST00000412200 877 ntBASIC0.48□□□□□ -2.33
CSMD1Q96PZ7 AL035666.1-201ENST00000446195 348 ntBASIC0.48□□□□□ -2.33
CSMD1Q96PZ7 LINC00557-201ENST00000563184 1279 ntBASIC0.48□□□□□ -2.33
CSMD1Q96PZ7 SNORD84-203ENST00000584275 78 ntBASIC0.48□□□□□ -2.33
CSMD1Q96PZ7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.48□□□□□ -2.33
CSMD1Q96PZ7 AC145207.9-201ENST00000623802 325 ntBASIC0.48□□□□□ -2.33
CSMD1Q96PZ7 AL356473.1-201ENST00000406203 1408 ntBASIC0.48□□□□□ -2.33
CSMD1Q96PZ7 RNU4-42P-201ENST00000364738 142 ntBASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 HMGN2P9-201ENST00000476875 229 ntBASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 AP003355.1-201ENST00000518956 587 ntBASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 AL022578.1-201ENST00000439330 1433 ntBASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 DUSP12P1-201ENST00000612874 516 ntBASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 MIR601-201ENST00000385256 79 ntBASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 AL121578.1-201ENST00000428051 892 ntBASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 RPS29P8-201ENST00000445109 171 ntBASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 AC073569.3-201ENST00000619055 682 ntBASIC0.47□□□□□ -2.33
CSMD1Q96PZ7 AC100821.1-201ENST00000523153 2479 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 RNA5SP98-201ENST00000363158 137 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 RNU4-67P-201ENST00000364569 141 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC093716.1-201ENST00000435923 377 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC097493.1-201ENST00000463958 372 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 RPL39P28-201ENST00000465655 155 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 SMARCE1P4-201ENST00000523647 241 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC007834.2-201ENST00000536310 343 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 SNORA63.3-201ENST00000362682 132 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 RNU6-1126P-201ENST00000384002 107 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 SNORA51.6-201ENST00000384151 125 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC073614.1-201ENST00000438690 650 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 RNU6-185P-201ENST00000384421 107 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 CCNB2P1-201ENST00000399411 1150 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AL591034.1-201ENST00000407447 340 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 RN7SKP61-201ENST00000410642 295 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC096649.2-201ENST00000416186 393 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC244453.4-201ENST00000419150 388 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC246680.2-201ENST00000422106 389 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC092628.1-201ENST00000436250 252 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AL353689.1-201ENST00000438895 199 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC098583.1-201ENST00000480875 255 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC118282.2-201ENST00000508739 374 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC025857.1-201ENST00000525252 377 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 AC084033.1-201ENST00000550830 633 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 Pinc.1-201ENST00000616452 154 ntBASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CSMD1Q96PZ7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 SNORA51.10-201ENST00000384418 136 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 HMGN2P30-201ENST00000423237 256 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 RNU6-928P-201ENST00000516876 104 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 SNORD118-201ENST00000363593 134 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 RNU6-923P-201ENST00000364753 107 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 CD24P4-201ENST00000382840 243 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 MIR146A-201ENST00000385201 99 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 SSR1P1-201ENST00000407630 814 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 AL031183.1-201ENST00000457667 207 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 snoU109.1-201ENST00000459339 135 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 MTCYBP23-201ENST00000558717 1102 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 ZNF33CP-201ENST00000432492 2030 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 Y_RNA.468-201ENST00000384298 102 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 AL356432.1-201ENST00000405809 419 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 MIR4287-201ENST00000579398 78 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 AC008083.4-201ENST00000615076 444 ntBASIC0.45□□□□□ -2.34
CSMD1Q96PZ7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 RNA5SP205-201ENST00000364653 136 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 RN7SKP142-201ENST00000411236 328 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 Z80107.1-201ENST00000436830 412 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 AC073111.2-201ENST00000605657 1075 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 AC087359.1-201ENST00000508335 1740 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 Y_RNA.185-201ENST00000363894 100 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 XKRYP1-201ENST00000423438 492 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 XKRYP2-201ENST00000432915 492 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 AL133507.1-201ENST00000605269 557 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 AC005332.10-201ENST00000612725 619 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 MIR26B-201ENST00000362251 77 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 AL161449.1-201ENST00000414531 1199 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms