Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AC009220.1-201ENST00000451614 275 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 RNU6-1037P-201ENST00000459571 107 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AC010285.1-201ENST00000470580 392 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 HMGN2P13-201ENST00000476476 274 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AC083829.1-201ENST00000503756 657 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 RNY3P15-201ENST00000516297 97 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 SCARNA15.2-201ENST00000516409 127 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AC040926.1-201ENST00000530195 238 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 MIR4277-201ENST00000578298 84 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 MIR4284-201ENST00000578924 81 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AL356218.2-201ENST00000605264 187 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 HMGB1P50-201ENST00000605814 607 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 MIR8062-201ENST00000621515 85 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AC092435.4-201ENST00000623012 4159 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 AL133412.1-201ENST00000380194 2992 ntBASIC4.2□□□□□ -1.74
PTCHD1Q96NR3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 MIR412-201ENST00000362142 91 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-37P-201ENST00000362692 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-11P-201ENST00000364234 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-335P-201ENST00000364563 113 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-7-201ENST00000364784 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-384P-201ENST00000364900 104 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-8-201ENST00000365467 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-25P-201ENST00000383873 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-1-201ENST00000383898 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 Y_RNA.396-201ENST00000383949 103 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-48P-201ENST00000384161 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-36P-201ENST00000384172 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-4P-201ENST00000384205 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-5P-201ENST00000384238 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-3P-201ENST00000384314 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-16P-201ENST00000384385 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-15P-201ENST00000384534 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-2-201ENST00000384627 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-29P-201ENST00000384637 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-713P-201ENST00000384761 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-9-201ENST00000384776 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-33P-201ENST00000384793 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 MIR195-201ENST00000385194 87 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 ELOCP19-201ENST00000411919 318 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 AC093852.1-201ENST00000503587 266 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNA5SP446-201ENST00000515955 82 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 Y_RNA.687-201ENST00000516558 91 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 AP000889.1-201ENST00000530968 660 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 RNU6-6P-201ENST00000606623 107 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 AL360181.4-201ENST00000621752 134 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 MTND5P7-201ENST00000413558 1798 ntBASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTCHD1Q96NR3 NCAPGP1-201ENST00000505112 1814 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 MTND5P27-201ENST00000428871 1720 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 RPL9P7-201ENST00000330965 580 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 RNY3P11-201ENST00000364153 102 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 RNU6-1317P-201ENST00000364582 104 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 U8.8-201ENST00000365399 135 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 DEFB109C-201ENST00000382575 264 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 DEFB109B-201ENST00000382656 264 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 RNU1-63P-201ENST00000383902 164 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 MIR141-201ENST00000384975 95 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 RPL21P1-201ENST00000399532 476 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AL591034.2-201ENST00000402839 359 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AL592148.1-201ENST00000413568 445 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms