Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AL391813.2-201ENST00000609113 322 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 AL161734.1-201ENST00000609720 557 ntBASIC2.71□□□□□ -1.98
ZNF560Q96MR9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.71□□□□□ -1.98
ZNF560Q96MR9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
ZNF560Q96MR9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ZNF560Q96MR9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL137003.2-201ENST00000606924 2538 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
ZNF560Q96MR9 RNU6-512P-201ENST00000364438 103 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
ZNF560Q96MR9 SET-203ENST00000372688 801 ntTSL 2 BASIC2.7□□□□□ -1.98
ZNF560Q96MR9 RNU6-14P-201ENST00000384630 106 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 RNU2-49P-201ENST00000410666 184 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL096701.2-201ENST00000416920 238 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 RAC1P6-201ENST00000423911 575 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL593851.1-201ENST00000426171 157 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL512286.1-201ENST00000439244 400 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 MTND5P2-201ENST00000442927 1142 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL513328.1-201ENST00000446460 224 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 ST13P20-201ENST00000447996 1065 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.7□□□□□ -1.98
ZNF560Q96MR9 RBM43P1-201ENST00000476891 1081 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 RPL23AP70-201ENST00000483361 460 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AC112204.1-201ENST00000502591 103 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.7□□□□□ -1.98
ZNF560Q96MR9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 RN7SKP287-201ENST00000516546 266 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 SCARNA11.3-201ENST00000517276 130 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AP001646.1-201ENST00000527936 915 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AC009094.1-201ENST00000564443 426 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL670379.6-201ENST00000603753 252 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL670379.11-201ENST00000604059 253 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL355598.1-201ENST00000604169 202 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AC008162.1-201ENST00000604718 254 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL670379.1-201ENST00000604752 252 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AC093424.1-201ENST00000604999 338 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL670379.5-201ENST00000605253 252 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL670379.12-201ENST00000605291 253 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL670379.8-201ENST00000605353 252 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AC121334.2-201ENST00000605387 271 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AL670379.7-201ENST00000605823 252 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AC034229.4-201ENST00000607861 441 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AC108747.1-201ENST00000609508 535 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 FRG1KP-201ENST00000623592 341 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 AC093591.3-201ENST00000634516 308 ntBASIC2.7□□□□□ -1.98
ZNF560Q96MR9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.69□□□□□ -1.98
ZNF560Q96MR9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
ZNF560Q96MR9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF560Q96MR9 RNU6-701P-201ENST00000384059 107 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AC006366.1-201ENST00000422002 759 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 MED14P1-201ENST00000430517 648 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AC092427.1-202ENST00000430569 476 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF560Q96MR9 RPL22P17-201ENST00000438729 315 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AC118469.1-201ENST00000442943 488 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AC104389.3-201ENST00000445629 235 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 MTATP6P7-201ENST00000453315 681 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AP000705.1-201ENST00000454567 350 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF560Q96MR9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF560Q96MR9 RPL23AP45-201ENST00000476406 468 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AC105252.1-201ENST00000503089 286 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AC112673.1-201ENST00000513168 575 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 RN7SKP40-201ENST00000517211 242 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 RPL7P20-201ENST00000520308 745 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 CKS1BP7-201ENST00000522230 235 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 MTND4LP18-201ENST00000526864 291 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF560Q96MR9 MIR3670-2-201ENST00000582974 65 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 MIR3670-1-201ENST00000584160 65 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 MIR3670-3-201ENST00000584855 65 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.69□□□□□ -1.98
ZNF560Q96MR9 OR1M4P-201ENST00000589199 287 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 MTCYBP22-201ENST00000603788 447 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 MIR3670-4-201ENST00000612260 65 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 CTSLP2-204ENST00000629029 392 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AC092192.1-201ENST00000633154 1018 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 IGHVIII-44-202ENST00000636235 289 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AC010149.2-201ENST00000637608 315 ntBASIC2.69□□□□□ -1.98
ZNF560Q96MR9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.69□□□□□ -1.98
ZNF560Q96MR9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.69□□□□□ -1.98
ZNF560Q96MR9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.69□□□□□ -1.98
ZNF560Q96MR9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AC092104.1-201ENST00000497346 1441 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 MIR449A-201ENST00000362113 91 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 RNU6-511P-201ENST00000363496 107 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 RNU6-809P-201ENST00000384461 107 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 MIR518C-201ENST00000384822 101 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 RNU6-817P-201ENST00000391083 104 ntBASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF560Q96MR9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms