Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC138Q96M89 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC138Q96M89 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC138Q96M89 RNA5SP124-201ENST00000362739 110 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 RNU6-371P-201ENST00000364283 108 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 Y_RNA.450-201ENST00000384198 113 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AL391417.1-201ENST00000404100 426 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AL354719.1-201ENST00000406535 843 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 SNORA11.2-201ENST00000408318 127 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 EEF1A1P40-201ENST00000412883 573 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 MTCO1P20-201ENST00000425366 358 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 SKA2P1-201ENST00000425592 390 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AC006946.1-201ENST00000429106 328 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 HMGB1P9-201ENST00000429856 646 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 SEPT14P3-201ENST00000439401 183 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 AL732372.2-207ENST00000445840 183 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 SEPT14P2-201ENST00000453405 183 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 RN7SL542P-201ENST00000467147 294 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 AP002812.1-201ENST00000495378 474 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 AC114786.4-201ENST00000508771 728 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AC104136.1-201ENST00000512969 394 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 SEPT14P4-201ENST00000513445 186 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 LRRC34P2-201ENST00000514850 553 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 SNORA31.21-201ENST00000517180 77 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 FO082796.1-201ENST00000523795 183 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 NACAP3-201ENST00000552100 481 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 H3F3AP1-201ENST00000559984 334 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AC034105.4-201ENST00000568304 277 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 AC007938.3-201ENST00000604965 623 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 RNU1-30P-201ENST00000606575 163 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AL121772.2-201ENST00000614331 297 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 U6atac.1-201ENST00000616025 117 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC138Q96M89 U6.42-201ENST00000618440 107 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AC026585.1-201ENST00000619582 524 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AP003122.6-201ENST00000623831 495 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC138Q96M89 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC138Q96M89 SRP72P2-201ENST00000344851 1979 ntBASIC3.61□□□□□ -1.83
CCDC138Q96M89 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CCDC138Q96M89 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC138Q96M89 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC138Q96M89 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC138Q96M89 SNORA57.3-201ENST00000411095 141 ntBASIC3.6□□□□□ -1.83
CCDC138Q96M89 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC138Q96M89 AL353729.1-201ENST00000425044 720 ntBASIC3.6□□□□□ -1.83
CCDC138Q96M89 AC098614.2-201ENST00000426040 255 ntBASIC3.6□□□□□ -1.83
CCDC138Q96M89 CYCSP32-201ENST00000440548 321 ntBASIC3.6□□□□□ -1.83
CCDC138Q96M89 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC138Q96M89 RPL21P13-201ENST00000488305 481 ntBASIC3.6□□□□□ -1.83
CCDC138Q96M89 AC026801.1-201ENST00000497178 464 ntBASIC3.6□□□□□ -1.83
CCDC138Q96M89 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC138Q96M89 RNA5SP401-201ENST00000515920 127 ntBASIC3.6□□□□□ -1.83
CCDC138Q96M89 RNU1-45P-201ENST00000517191 141 ntBASIC3.6□□□□□ -1.83
CCDC138Q96M89 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC138Q96M89 AC023632.4-201ENST00000517783 191 ntBASIC3.6□□□□□ -1.83
CCDC138Q96M89 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC138Q96M89 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC138Q96M89 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC138Q96M89 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC138Q96M89 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC138Q96M89 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCDC138Q96M89 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.6□□□□□ -1.83
CCDC138Q96M89 U6.99-201ENST00000637524 83 ntBASIC3.6□□□□□ -1.83
CCDC138Q96M89 AP000553.6-201ENST00000641242 118 ntBASIC3.6□□□□□ -1.83
CCDC138Q96M89 AL354685.2-201ENST00000448218 1447 ntBASIC3.6□□□□□ -1.83
CCDC138Q96M89 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC138Q96M89 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC138Q96M89 RNU6-1090P-201ENST00000364065 94 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC138Q96M89 Y_RNA.573-201ENST00000384763 105 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 MIR578-201ENST00000384828 96 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 SNORD37.1-201ENST00000390968 65 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 RPL21P90-201ENST00000415692 466 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC138Q96M89 AL121769.1-201ENST00000469473 401 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 MTAPP1-201ENST00000489154 819 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 RPS29P20-201ENST00000489592 171 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 AC022493.1-201ENST00000492984 337 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 RPS27AP10-201ENST00000496103 208 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 AC009901.1-201ENST00000506703 541 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC138Q96M89 PHBP14-201ENST00000512887 367 ntBASIC3.59□□□□□ -1.83
CCDC138Q96M89 RNU6-718P-201ENST00000516166 105 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms