Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 AC006927.3-201ENST00000638789 384 ntBASIC2.8□□□□□ -1.96
RPGRIP1Q96KN7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
RPGRIP1Q96KN7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.8□□□□□ -1.96
RPGRIP1Q96KN7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPGRIP1Q96KN7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 RNU1-105P-201ENST00000363470 161 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 RNU6-501P-201ENST00000364072 100 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 RNU2-33P-201ENST00000410344 192 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 RNU4-53P-201ENST00000410828 140 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 RPLP0P7-201ENST00000416050 667 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AL365184.2-201ENST00000431139 435 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 RPS3AP22-201ENST00000488297 769 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 MRPS33P3-201ENST00000513456 322 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 RNA5SP402-201ENST00000517148 110 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AC109329.2-201ENST00000519658 482 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 DEFB108A-201ENST00000530110 222 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AL356432.3-201ENST00000568952 465 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AC108747.1-201ENST00000609508 535 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AC245517.5-201ENST00000611529 162 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 ZNF519P1-201ENST00000449011 1626 ntBASIC2.79□□□□□ -1.96
RPGRIP1Q96KN7 AL445523.1-201ENST00000451184 1362 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 RNU5F-6P-201ENST00000362979 116 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 RNA5SP393-201ENST00000363423 117 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 MIR767-201ENST00000390228 109 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 RNA5SP210-201ENST00000391034 120 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AL359634.1-202ENST00000404721 284 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 RNA5SP425-201ENST00000410336 112 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AL591806.2-201ENST00000433122 173 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 TIMM9P1-201ENST00000436122 256 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AL512286.1-201ENST00000439244 400 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC118469.1-201ENST00000442943 488 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC020550.1-201ENST00000447385 163 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 ZNF114P1-201ENST00000453500 292 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AL139824.2-201ENST00000458731 1095 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC108210.2-201ENST00000503681 201 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC005178.1-201ENST00000508392 440 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 IGKV3-31-201ENST00000523109 329 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC123904.2-201ENST00000548059 300 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC093012.1-202ENST00000549403 582 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 MIR4446-201ENST00000578505 67 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AL049779.4-201ENST00000604500 156 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC007621.1-201ENST00000604544 437 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC104237.2-201ENST00000612456 443 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 MIR7844-201ENST00000616161 122 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC091304.6-201ENST00000619761 202 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 UCA1.1-201ENST00000620952 75 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC079248.2-201ENST00000623779 326 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 AC093591.3-201ENST00000634516 308 ntBASIC2.78□□□□□ -1.96
RPGRIP1Q96KN7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
RPGRIP1Q96KN7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 AC022336.2-201ENST00000568966 2538 ntBASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 SNORD62.1-201ENST00000362541 86 ntBASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 RNU1-138P-201ENST00000384093 164 ntBASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 RNU6-217P-201ENST00000384164 104 ntBASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 RNU6-278P-201ENST00000390945 109 ntBASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 MIR1289-2-201ENST00000408360 111 ntBASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 RNU6-193P-201ENST00000410977 107 ntBASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 MTND4P20-201ENST00000424125 869 ntBASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 CACYBPP2-201ENST00000453625 678 ntBASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.77□□□□□ -1.97
RPGRIP1Q96KN7 AC108059.3-201ENST00000456388 214 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms