Protein–RNA interactions for Protein: Q96HJ3

CCDC34, Coiled-coil domain-containing protein 34, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC34Q96HJ3 SNORA54-201ENST00000384281 123 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 RNA5SP354-201ENST00000391247 136 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 AL512633.1-201ENST00000399931 655 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 AL139397.2-201ENST00000404529 772 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 YME1L1P1-201ENST00000429435 297 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 RPL23AP30-201ENST00000432419 501 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 BNIP3P2-201ENST00000441221 577 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 AC093899.1-201ENST00000457984 376 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 RPS29P20-201ENST00000489592 171 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 RN7SL504P-201ENST00000494496 287 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 MTND4P2-201ENST00000507767 1203 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 Vault.3-201ENST00000516676 95 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 Z84480.1-201ENST00000605131 311 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 AC097065.2-201ENST00000608159 533 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 FRG1KP-201ENST00000623592 341 ntBASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC34Q96HJ3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.21□□□□□ -1.89
CCDC34Q96HJ3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 RNU5E-6P-201ENST00000365574 115 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 RNU6-348P-201ENST00000384386 107 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 RNU2-8P-201ENST00000410727 190 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 BTF3L4P1-201ENST00000413813 468 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 AL096701.2-201ENST00000416920 238 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 AC137499.1-201ENST00000427602 88 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 AL592045.1-201ENST00000429867 352 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 AC092427.1-202ENST00000430569 476 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 RPL36AP53-201ENST00000432891 316 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 KATNBL1P3-201ENST00000443475 909 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 SNORD97-201ENST00000459187 142 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 SNORD42A-201ENST00000459584 64 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 RPL9P33-201ENST00000484311 566 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 AC138853.1-201ENST00000503549 823 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 RNU6-927P-201ENST00000516199 100 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 RNU6-1092P-201ENST00000516955 87 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 AC010546.1-201ENST00000569391 485 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 MIR3682-201ENST00000581338 84 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 AC090578.1-201ENST00000604955 591 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 AC004805.2-201ENST00000605382 482 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 PISRT1-201ENST00000626175 531 ntBASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CCDC34Q96HJ3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 AL390237.1-201ENST00000404226 1415 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 MIR181A2-201ENST00000384863 110 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 AL138885.1-201ENST00000405921 675 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 SNORA11.1-201ENST00000408133 129 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 AC009414.1-201ENST00000427200 443 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 GPM6BP2-201ENST00000432046 144 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 AL031667.1-201ENST00000440222 725 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 GPM6BP1-201ENST00000446387 144 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 NIPA2P5-201ENST00000452282 464 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 GSTA11P-201ENST00000452866 669 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 AL122001.1-201ENST00000457027 370 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 snoU13.22-201ENST00000459428 104 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 RPS27AP9-201ENST00000477681 438 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 RNA5SP165-201ENST00000517142 115 ntBASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC34Q96HJ3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms