Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 Y_RNA.212-201ENST00000364177 102 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 RNA5SP97-201ENST00000365006 84 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 SNORA75B-201ENST00000384053 137 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 MIR7-3-201ENST00000384898 110 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 ARF4P3-201ENST00000397387 509 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 RPL21P17-201ENST00000397467 475 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 UBE2V1P2-201ENST00000397758 440 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 AL031679.1-201ENST00000400616 525 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 SNORA3.3-201ENST00000408712 125 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC012065.2-201ENST00000421295 375 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC017083.1-201ENST00000428093 483 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC083863.1-201ENST00000438811 231 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.02□□□□□ -1.77
CHFRQ96EP1 AL451050.1-201ENST00000450126 415 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC104563.1-201ENST00000476147 376 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC090453.1-201ENST00000495560 436 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 MTND1P19-201ENST00000511780 315 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 HIGD1AP3-201ENST00000515857 278 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 IGKV2-23-201ENST00000518729 323 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CHFRQ96EP1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC128657.1-201ENST00000549459 145 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC022968.1-201ENST00000567372 442 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC008687.2-201ENST00000597865 520 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC104662.1-201ENST00000604448 511 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC005344.1-201ENST00000613391 459 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC141273.2-201ENST00000618989 130 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC012314.7-201ENST00000619693 93 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC103858.2-201ENST00000621471 543 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 AC121333.1-201ENST00000567488 2709 ntBASIC4.02□□□□□ -1.77
CHFRQ96EP1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.02□□□□□ -1.77
CHFRQ96EP1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CHFRQ96EP1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 Y_RNA.117-201ENST00000363294 101 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 RNU6-450P-201ENST00000364654 107 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 RNU6-33P-201ENST00000384793 107 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 ARL5AP1-201ENST00000418991 388 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 AL139396.1-201ENST00000421137 167 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 PSMA6P3-201ENST00000428242 164 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 AC010881.1-201ENST00000433830 235 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 AL392103.1-201ENST00000447000 198 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 RPL31P13-201ENST00000484151 370 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 AC055855.1-201ENST00000489563 579 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 UBE2CP3-201ENST00000502715 450 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 GZMAP1-201ENST00000503054 631 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 RNU2-53P-201ENST00000516257 147 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 AC138761.3-201ENST00000579993 334 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 AC023043.2-201ENST00000589678 1026 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CHFRQ96EP1 IGHV3-29-201ENST00000604817 344 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 AC006023.2-201ENST00000609916 167 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 AL357559.1-201ENST00000622228 274 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHFRQ96EP1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CHFRQ96EP1 AC007256.1-201ENST00000392253 2765 ntBASIC4.01□□□□□ -1.77
CHFRQ96EP1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CHFRQ96EP1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
CHFRQ96EP1 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4□□□□□ -1.77
CHFRQ96EP1 AC005592.1-201ENST00000566527 1640 ntBASIC4□□□□□ -1.77
CHFRQ96EP1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CHFRQ96EP1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CHFRQ96EP1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4□□□□□ -1.77
CHFRQ96EP1 SNORD113-7-201ENST00000363762 77 ntBASIC4□□□□□ -1.77
CHFRQ96EP1 SNORA62.1-201ENST00000364287 154 ntBASIC4□□□□□ -1.77
CHFRQ96EP1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CHFRQ96EP1 Y_RNA.389-201ENST00000383924 113 ntBASIC4□□□□□ -1.77
CHFRQ96EP1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4□□□□□ -1.77
CHFRQ96EP1 RPL31P2-201ENST00000413849 377 ntBASIC4□□□□□ -1.77
CHFRQ96EP1 ATG3P1-201ENST00000419507 911 ntBASIC4□□□□□ -1.77
CHFRQ96EP1 AC137499.1-201ENST00000427602 88 ntBASIC4□□□□□ -1.77
CHFRQ96EP1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4□□□□□ -1.77
CHFRQ96EP1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4□□□□□ -1.77
CHFRQ96EP1 AL133162.1-201ENST00000463228 453 ntBASIC4□□□□□ -1.77
CHFRQ96EP1 RPS4XP13-201ENST00000483219 789 ntBASIC4□□□□□ -1.77
CHFRQ96EP1 Y_RNA.654-201ENST00000497848 106 ntBASIC4□□□□□ -1.77
CHFRQ96EP1 RNU6-699P-201ENST00000517081 110 ntBASIC4□□□□□ -1.77
CHFRQ96EP1 AP000907.2-201ENST00000530827 353 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms