Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AL133243.3-201ENST00000617415 3004 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 OR14L1P-202ENST00000641545 3009 ntBASIC5.23□□□□□ -1.57
VTI1AQ96AJ9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 RNU6-1167P-201ENST00000363227 94 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 RNU6-335P-201ENST00000364563 113 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 RNU6-384P-201ENST00000364900 104 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 RNU6-629P-201ENST00000384061 103 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 MIR1302-6-201ENST00000408466 90 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 RNA5SP239-201ENST00000410218 129 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 RPL7AP25-201ENST00000423357 805 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 AC011998.1-201ENST00000433403 117 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 SUMO1P3-201ENST00000439961 304 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 AC133473.1-201ENST00000455173 299 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 RN7SL303P-201ENST00000469773 251 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 NDUFB4P9-201ENST00000511646 388 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 RNA5SP360-201ENST00000516555 118 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 FKBP1BP1-201ENST00000553366 325 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 MIR3128-201ENST00000581957 66 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 VN1R91P-201ENST00000594377 169 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 IPO5P1-202ENST00000600039 287 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 VN1R85P-201ENST00000601587 426 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 AL161798.1-201ENST00000604630 131 ntBASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VTI1AQ96AJ9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.21□□□□□ -1.57
VTI1AQ96AJ9 AC139713.2-215ENST00000641428 5037 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 SNORA7.2-201ENST00000364446 145 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 RNU6-933P-201ENST00000384424 107 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 MIR514A1-201ENST00000385133 98 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 MIR708-201ENST00000390708 88 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 AL592291.1-201ENST00000403830 352 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 AL356387.2-201ENST00000422272 243 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 SUMO1P2-201ENST00000452524 304 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 AC078918.1-201ENST00000498515 228 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 AC008958.1-201ENST00000511047 682 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 RNU6-397P-201ENST00000516226 104 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 OR5D17P-201ENST00000531492 978 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 HSPE1P20-201ENST00000538133 289 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 AC004584.2-201ENST00000570407 410 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 AC107294.1-201ENST00000609524 467 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 AC006023.2-201ENST00000609916 167 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTI1AQ96AJ9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 SCN1A-220ENST00000641603 12506 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 Y_RNA.33-201ENST00000362591 102 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-37P-201ENST00000362692 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 Y_RNA.60-201ENST00000362831 98 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-11P-201ENST00000364234 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-7-201ENST00000364784 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNA5SP167-201ENST00000365461 116 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-8-201ENST00000365467 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-395P-201ENST00000365662 106 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-25P-201ENST00000383873 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-1-201ENST00000383898 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-48P-201ENST00000384161 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-36P-201ENST00000384172 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-4P-201ENST00000384205 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-5P-201ENST00000384238 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-3P-201ENST00000384314 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-16P-201ENST00000384385 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 SNORA51.11-201ENST00000384442 131 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-15P-201ENST00000384534 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 SNORA70C-201ENST00000384538 135 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-2-201ENST00000384627 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-29P-201ENST00000384637 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-9-201ENST00000384776 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 RNU6-33P-201ENST00000384793 107 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 MIR23B-201ENST00000384832 97 ntBASIC5.2□□□□□ -1.58
VTI1AQ96AJ9 MIR625-201ENST00000385047 85 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms