Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 SNORA73.2-201ENST00000364946 201 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 Y_RNA.333-201ENST00000365274 102 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 AL591034.1-201ENST00000407447 340 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.93□□□□□ -1.78
HPS3Q969F9 ARL5AP1-201ENST00000418991 388 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 AC092573.2-201ENST00000434546 243 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.93□□□□□ -1.78
HPS3Q969F9 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 RPS3AP46-201ENST00000448352 682 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 MTND3P16-201ENST00000452205 344 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.93□□□□□ -1.78
HPS3Q969F9 RPL7P5-201ENST00000471472 736 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.93□□□□□ -1.78
HPS3Q969F9 AC025465.4-201ENST00000513422 638 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 LRRC34P2-201ENST00000514850 553 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 RNU1-95P-201ENST00000516357 160 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 RNU1-128P-201ENST00000516704 160 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 TRMT10BP1-201ENST00000519377 943 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.93□□□□□ -1.78
HPS3Q969F9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.93□□□□□ -1.78
HPS3Q969F9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HPS3Q969F9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.93□□□□□ -1.78
HPS3Q969F9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.93□□□□□ -1.78
HPS3Q969F9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.93□□□□□ -1.78
HPS3Q969F9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.93□□□□□ -1.78
HPS3Q969F9 AL512643.1-201ENST00000635735 524 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HPS3Q969F9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HPS3Q969F9 AC068647.1-201ENST00000489539 2265 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 AC010733.2-201ENST00000589496 5702 ntBASIC3.93□□□□□ -1.78
HPS3Q969F9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HPS3Q969F9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HPS3Q969F9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HPS3Q969F9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HPS3Q969F9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HPS3Q969F9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HPS3Q969F9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HPS3Q969F9 RNU6-525P-201ENST00000363685 104 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 Y_RNA.390-201ENST00000383932 102 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 SNORA5A-201ENST00000384111 134 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 MT-TL1-201ENST00000386347 75 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 FAT1P1-201ENST00000406588 507 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 U3.39-201ENST00000408569 239 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HPS3Q969F9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.92□□□□□ -1.78
HPS3Q969F9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.92□□□□□ -1.78
HPS3Q969F9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.92□□□□□ -1.78
HPS3Q969F9 UBE2D3P2-201ENST00000424409 445 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 AL592045.1-201ENST00000429867 352 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 RPL36AP53-201ENST00000432891 316 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.92□□□□□ -1.78
HPS3Q969F9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.92□□□□□ -1.78
HPS3Q969F9 RPL21P99-201ENST00000480369 423 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 AC018710.1-201ENST00000506509 158 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 HMGB3P15-201ENST00000507326 574 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 HMGN1P11-201ENST00000508668 303 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 RNU6-1282P-201ENST00000516735 96 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 AC026333.2-201ENST00000542164 106 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.92□□□□□ -1.78
HPS3Q969F9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HPS3Q969F9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.92□□□□□ -1.78
HPS3Q969F9 BNIP3P10-201ENST00000605360 577 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 U7.8-201ENST00000619968 63 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 DUXAP9-208ENST00000622815 614 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.92□□□□□ -1.78
HPS3Q969F9 Z99571.1-201ENST00000636677 394 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 AC012442.3-202ENST00000636742 206 ntBASIC3.92□□□□□ -1.78
HPS3Q969F9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
HPS3Q969F9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HPS3Q969F9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HPS3Q969F9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HPS3Q969F9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HPS3Q969F9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HPS3Q969F9 MIR208A-201ENST00000362287 71 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 Y_RNA.231-201ENST00000364358 102 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 Y_RNA.534-201ENST00000384599 112 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 MIR325-201ENST00000385260 98 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HPS3Q969F9 AL592114.1-201ENST00000403842 483 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.91□□□□□ -1.78
HPS3Q969F9 RPL30P16-201ENST00000419341 429 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 AC006989.1-201ENST00000427212 131 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.91□□□□□ -1.78
HPS3Q969F9 ERLEC1P1-201ENST00000433806 578 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 AL512844.2-201ENST00000433990 593 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 AL121601.2-201ENST00000438019 707 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 MRPS31P2-201ENST00000451581 518 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 RPL7P49-201ENST00000471402 708 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.91□□□□□ -1.78
HPS3Q969F9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.91□□□□□ -1.78
HPS3Q969F9 RNU6-579P-201ENST00000516879 102 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.91□□□□□ -1.78
HPS3Q969F9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.91□□□□□ -1.78
HPS3Q969F9 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.91□□□□□ -1.78
HPS3Q969F9 MIR3922-201ENST00000585192 84 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 AC009570.1-201ENST00000609599 745 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 AC019176.2-201ENST00000611579 315 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.91□□□□□ -1.78
HPS3Q969F9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms