Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-CQ95604 RNU5F-8P-201ENST00000515941 111 ntBASIC5.39□□□□□ -1.55
HLA-CQ95604 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-CQ95604 AP002826.1-201ENST00000608835 315 ntBASIC5.39□□□□□ -1.55
HLA-CQ95604 AC068831.7-201ENST00000616954 363 ntBASIC5.39□□□□□ -1.55
HLA-CQ95604 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-CQ95604 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HLA-CQ95604 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-CQ95604 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HLA-CQ95604 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-CQ95604 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HLA-CQ95604 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-CQ95604 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-CQ95604 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-CQ95604 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-CQ95604 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-CQ95604 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-CQ95604 ZNF204P-201ENST00000416749 2397 ntBASIC5.38□□□□□ -1.55
HLA-CQ95604 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HLA-CQ95604 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-CQ95604 AL034549.2-201ENST00000618285 3373 ntBASIC5.38□□□□□ -1.55
HLA-CQ95604 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-CQ95604 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-CQ95604 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-CQ95604 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-CQ95604 RNA5SP515-201ENST00000364570 118 ntBASIC5.38□□□□□ -1.55
HLA-CQ95604 RNU6-211P-201ENST00000384047 107 ntBASIC5.38□□□□□ -1.55
HLA-CQ95604 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-CQ95604 RNA5SP44-201ENST00000410446 133 ntBASIC5.38□□□□□ -1.55
HLA-CQ95604 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-CQ95604 KRT8P51-201ENST00000438938 274 ntBASIC5.38□□□□□ -1.55
HLA-CQ95604 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-CQ95604 RNA5SP464-201ENST00000516251 108 ntBASIC5.38□□□□□ -1.55
HLA-CQ95604 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-CQ95604 AC107016.1-201ENST00000550463 337 ntBASIC5.38□□□□□ -1.55
HLA-CQ95604 TRAV28-201ENST00000557548 323 ntBASIC5.38□□□□□ -1.55
HLA-CQ95604 RN7SL690P-201ENST00000582087 240 ntBASIC5.38□□□□□ -1.55
HLA-CQ95604 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-CQ95604 AC024581.2-201ENST00000619986 252 ntBASIC5.38□□□□□ -1.55
HLA-CQ95604 Y_RNA.778-201ENST00000620203 90 ntBASIC5.38□□□□□ -1.55
HLA-CQ95604 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-CQ95604 AC093671.1-201ENST00000624981 2929 ntBASIC5.38□□□□□ -1.55
HLA-CQ95604 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HLA-CQ95604 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-CQ95604 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HLA-CQ95604 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HLA-CQ95604 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-CQ95604 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HLA-CQ95604 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-CQ95604 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HLA-CQ95604 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HLA-CQ95604 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
HLA-CQ95604 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HLA-CQ95604 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 SNORD20-201ENST00000384550 80 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 AL358075.3-201ENST00000426289 226 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 AC007919.1-201ENST00000429380 217 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 AC243964.1-201ENST00000441814 261 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 RPL7AP61-201ENST00000443410 636 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-CQ95604 RN7SL188P-201ENST00000469842 285 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-CQ95604 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-CQ95604 AC108145.1-201ENST00000503770 153 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-CQ95604 RN7SKP276-201ENST00000516242 268 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 RNU6-58P-201ENST00000517143 103 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 TGIF1P1-201ENST00000558095 802 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-CQ95604 MIR5571-201ENST00000577998 113 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-CQ95604 AC090132.2-201ENST00000615881 347 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 AC084757.4-201ENST00000616350 526 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-CQ95604 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 AC015813.6-201ENST00000624409 5808 ntBASIC5.37□□□□□ -1.55
HLA-CQ95604 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
HLA-CQ95604 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-CQ95604 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-CQ95604 AC135776.4-201ENST00000624300 1904 ntBASIC5.36□□□□□ -1.55
HLA-CQ95604 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-CQ95604 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-CQ95604 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-CQ95604 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-CQ95604 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HLA-CQ95604 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-CQ95604 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-CQ95604 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-CQ95604 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms