Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 RPL30P4-201ENST00000429309 333 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AC118273.2-201ENST00000532092 465 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AC025423.2-201ENST00000537570 439 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 ZNF37BP-203ENST00000452306 1352 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 SNORA25.8-201ENST00000364831 128 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 MIR5571-201ENST00000577998 113 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 Z69720.2-201ENST00000624755 279 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 FAM157B-203ENST00000639350 358 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 ZNF702P-202ENST00000434269 1966 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 HAUS6P2-201ENST00000433254 2404 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 SNORA68.1-201ENST00000364537 132 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AC008676.3-201ENST00000521237 435 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AC012497.1-201ENST00000429392 575 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 RPL39P28-201ENST00000465655 155 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 RNU7-193P-201ENST00000516723 65 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 AC040174.2-201ENST00000602701 465 ntBASIC0.6□□□□□ -2.31
ALMS1Q8TCU4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
ALMS1Q8TCU4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.59□□□□□ -2.31
ALMS1Q8TCU4 RPL7L1P10-201ENST00000427790 463 ntBASIC0.59□□□□□ -2.31
ALMS1Q8TCU4 AC004022.1-201ENST00000447766 1066 ntBASIC0.59□□□□□ -2.31
ALMS1Q8TCU4 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.59□□□□□ -2.31
ALMS1Q8TCU4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.59□□□□□ -2.31
ALMS1Q8TCU4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.59□□□□□ -2.31
ALMS1Q8TCU4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.59□□□□□ -2.31
ALMS1Q8TCU4 AC087465.1-201ENST00000560574 245 ntBASIC0.59□□□□□ -2.31
ALMS1Q8TCU4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.59□□□□□ -2.31
ALMS1Q8TCU4 AL158032.1-201ENST00000605401 106 ntBASIC0.59□□□□□ -2.31
ALMS1Q8TCU4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.59□□□□□ -2.31
ALMS1Q8TCU4 AC008163.1-202ENST00000636004 2889 ntBASIC0.59□□□□□ -2.31
ALMS1Q8TCU4 Y_RNA.48-201ENST00000362710 103 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 JTBP1-201ENST00000441314 247 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 RPS27P26-201ENST00000494583 239 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 AC004852.3-201ENST00000614131 326 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 MIR6835-201ENST00000621552 64 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 AC123912.3-201ENST00000600907 1367 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 AC007785.2-201ENST00000598627 1916 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 RNU6-629P-201ENST00000384061 103 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 OR6C66P-201ENST00000414917 930 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 AL022238.1-201ENST00000442557 355 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 AC104229.1-201ENST00000561364 255 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 MIR4723-201ENST00000585070 81 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 MIR8087-201ENST00000612745 78 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 MIR6759-201ENST00000638110 65 ntBASIC0.59□□□□□ -2.32
ALMS1Q8TCU4 RNU6-115P-201ENST00000364310 107 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 RNU6-670P-201ENST00000364312 104 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 SFR1P1-201ENST00000403720 688 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 TPMTP4-201ENST00000450749 678 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 MIR4422-201ENST00000581938 83 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 DPRXP5-201ENST00000604662 539 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 AC113194.1-201ENST00000606037 500 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 MTND4P12-201ENST00000498999 1377 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 RNU4-31P-201ENST00000384211 141 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 RPL23AP3-201ENST00000453844 468 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 SNORA31.8-201ENST00000516327 108 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 RNU6-943P-201ENST00000516960 98 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 HSPE1P7-201ENST00000604681 321 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 AC007742.2-201ENST00000618226 398 ntBASIC0.58□□□□□ -2.32
ALMS1Q8TCU4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 UBE2V1P9-201ENST00000414760 368 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 ELOCP11-201ENST00000436690 332 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 ELOCP16-201ENST00000444494 332 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 SNRPGP6-201ENST00000451124 220 ntBASIC0.57□□□□□ -2.32
ALMS1Q8TCU4 PCNAP1-202ENST00000595299 752 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms