Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AC008669.1-201ENST00000565823 2178 ntBASIC1.95□□□□□ -2.1
LINC01560Q8TB33 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01560Q8TB33 AL355596.1-201ENST00000565399 3996 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 Y_RNA.46-201ENST00000362695 102 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 U8.14-201ENST00000390843 143 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AL023284.1-201ENST00000403956 276 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 GSTA9P-201ENST00000406231 611 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 RAP1BP1-201ENST00000412709 553 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 HIGD1AP15-201ENST00000416198 280 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 BTF3L4P3-201ENST00000418879 476 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 ATG3P1-201ENST00000419507 911 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC244035.1-201ENST00000430042 390 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 GTF2IP20-201ENST00000431663 360 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 GDI2P2-201ENST00000445131 608 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 TRBV1-201ENST00000476502 284 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 MTND5P13-201ENST00000513046 1079 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 RNU6-927P-201ENST00000516199 100 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 RNA5SP291-201ENST00000517222 105 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 ATP5F1P5-201ENST00000526403 760 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC093012.1-202ENST00000549403 582 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC010546.1-201ENST00000569391 485 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC008751.2-201ENST00000597885 980 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AP000403.1-201ENST00000603349 851 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 MTND4LP5-201ENST00000605152 292 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC108747.1-201ENST00000609508 535 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC245517.5-201ENST00000611529 162 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 SNHG22-203ENST00000617833 660 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC023510.2-201ENST00000622162 746 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 AC099654.7-201ENST00000635788 2127 ntBASIC1.94□□□□□ -2.1
LINC01560Q8TB33 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01560Q8TB33 RNU6-884P-201ENST00000363889 107 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 RNA5SP99-201ENST00000364020 114 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 RNU5A-8P-201ENST00000364102 114 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 OR5H15-201ENST00000383696 930 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AC011233.1-201ENST00000422812 283 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AL593851.1-201ENST00000426171 157 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AL591719.1-201ENST00000444669 744 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AC092798.1-201ENST00000458542 409 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 MRPS17P3-201ENST00000465453 385 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AC008571.1-201ENST00000467232 300 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 RPS27AP9-201ENST00000477681 438 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AC068587.2-201ENST00000478386 781 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AL160314.1-201ENST00000490836 438 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 MTCO1P47-201ENST00000523889 1271 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AC087373.1-201ENST00000524920 491 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 DEFB108A-201ENST00000530110 222 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 OR5BN1P-201ENST00000532955 829 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 NRBF2P1-201ENST00000587407 859 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AC112187.2-201ENST00000604345 283 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 RPL23AP88-201ENST00000605759 454 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 OR10AB1P-201ENST00000609613 938 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 AC004852.3-201ENST00000614131 326 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 MIR6766-201ENST00000622641 72 ntBASIC1.93□□□□□ -2.1
LINC01560Q8TB33 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LINC01560Q8TB33 RPS20P2-201ENST00000402520 389 ntBASIC1.92□□□□□ -2.1
LINC01560Q8TB33 HMGN2P35-201ENST00000412164 270 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms