Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 Y_RNA.474-201ENST00000384341 102 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 RNU6-903P-201ENST00000391270 109 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 Y_RNA.615-201ENST00000410769 117 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 RNU6-193P-201ENST00000410977 107 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AL354751.2-201ENST00000415471 210 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AL138785.1-201ENST00000425821 331 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO3Q8TAP4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.25□□□□□ -1.89
LMO3Q8TAP4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.25□□□□□ -1.89
LMO3Q8TAP4 snoU109.4-201ENST00000458953 143 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 RNU7-59P-201ENST00000459101 61 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 RNU6-333P-201ENST00000459117 107 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AC117440.1-201ENST00000474107 571 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AC004062.1-201ENST00000509926 645 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 Y_RNA.691-201ENST00000516611 103 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.25□□□□□ -1.89
LMO3Q8TAP4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AL133153.1-201ENST00000557756 303 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AL355375.2-201ENST00000574825 175 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 MIR3944-201ENST00000581277 108 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 MIR4424-201ENST00000585257 86 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AC022432.1-201ENST00000595739 310 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AC243960.4-201ENST00000600532 288 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AC004908.2-201ENST00000609090 574 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 AC130324.3-201ENST00000614165 542 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 TPTEP1-208ENST00000636884 213 ntBASIC3.25□□□□□ -1.89
LMO3Q8TAP4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 RNA5SP374-201ENST00000362939 125 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 RNU4-20P-201ENST00000365601 151 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 Y_RNA.394-201ENST00000383942 103 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 Y_RNA.419-201ENST00000384041 102 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 RNU6-339P-201ENST00000384310 107 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 MIR1302-11-201ENST00000408051 138 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 MIR1302-9-201ENST00000408365 138 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 MIR1302-10-201ENST00000408734 138 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 ERLEC1P1-201ENST00000433806 578 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 HMGB1P25-201ENST00000468402 607 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 RPL7P49-201ENST00000471402 708 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 HMGN1P10-201ENST00000474557 553 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC026427.2-201ENST00000506228 536 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC092436.1-201ENST00000506450 503 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC091885.1-201ENST00000506658 268 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 BTF3P12-201ENST00000519620 469 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC128657.1-201ENST00000549459 145 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AC012468.1-201ENST00000604888 430 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 MIR1302-2-201ENST00000607096 138 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 uc_338.5-201ENST00000611839 155 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AP001486.3-201ENST00000615334 372 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 GABRG2-229ENST00000641017 3628 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 AP003122.5-201ENST00000527668 3766 ntBASIC3.24□□□□□ -1.89
LMO3Q8TAP4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
LMO3Q8TAP4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.23□□□□□ -1.89
LMO3Q8TAP4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LMO3Q8TAP4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
LMO3Q8TAP4 Y_RNA.231-201ENST00000364358 102 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 Y_RNA.326-201ENST00000365176 113 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 RNU6-692P-201ENST00000384496 107 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 RNU6-831P-201ENST00000384548 107 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 RNU6-754P-201ENST00000391166 107 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 AC009161.1-201ENST00000417306 376 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 NCOR1P3-201ENST00000420479 303 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 AC024082.2-201ENST00000434771 238 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 RPL37P4-201ENST00000448908 268 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.23□□□□□ -1.89
LMO3Q8TAP4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.23□□□□□ -1.89
LMO3Q8TAP4 RNU7-182P-201ENST00000459009 62 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 RPL21P41-201ENST00000459863 264 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 MRPS17P3-201ENST00000465453 385 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 RN7SL330P-201ENST00000469709 307 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 RN7SL633P-201ENST00000488974 297 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LMO3Q8TAP4 AC116562.3-201ENST00000506136 177 ntBASIC3.23□□□□□ -1.89
LMO3Q8TAP4 TTC39CP1-201ENST00000512513 755 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms