Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 RPL26P27-201ENST00000414397 437 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AC092809.3-201ENST00000415453 231 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 RPLP0P7-201ENST00000416050 667 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 MTND3P17-201ENST00000416968 344 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 MED13P1-201ENST00000428342 171 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 RPS20P5-201ENST00000434808 360 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AC008885.1-201ENST00000514930 301 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 Vault.3-201ENST00000516676 95 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 RNU6-677P-201ENST00000516914 101 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AC026403.1-201ENST00000518938 295 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AC022634.1-201ENST00000520765 532 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 SUB1P1-201ENST00000524415 382 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 OR5B19P-201ENST00000531766 928 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AC008739.2-201ENST00000597006 317 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AC010620.1-201ENST00000601088 1102 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AC174048.1-201ENST00000603389 144 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AC024220.1-201ENST00000603675 484 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AC090578.1-201ENST00000604955 591 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AC022893.3-201ENST00000607665 437 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AL136295.6-201ENST00000610486 658 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AC008498.1-201ENST00000613012 531 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 AL133173.2-201ENST00000614270 90 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 FO624990.1-201ENST00000636373 85 ntBASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CCDC197Q8NCU1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 ELF2P3-201ENST00000445099 1506 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 RNU6-1180P-201ENST00000364935 107 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 RNU6-169P-201ENST00000365336 107 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 RNU1-73P-201ENST00000383971 164 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 MIR767-201ENST00000390228 109 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 SNORA48.5-201ENST00000391143 135 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 NDUFS5P4-201ENST00000412983 318 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AL513477.1-202ENST00000417061 214 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 BPY2DP-201ENST00000422208 265 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AL591212.2-201ENST00000433923 257 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AC007389.2-201ENST00000434630 306 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AL353706.1-201ENST00000436728 494 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 MTND4P25-201ENST00000441039 533 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 USP9YP29-201ENST00000445112 563 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AL358232.1-201ENST00000448030 501 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AIG1P1-201ENST00000503376 148 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 SNORA18.6-201ENST00000516792 115 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AP003122.3-201ENST00000526316 255 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AC084851.1-201ENST00000529105 249 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 PRELID2P1-201ENST00000552837 301 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 MIR4700-201ENST00000578311 74 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 NRBF2P1-201ENST00000587407 859 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AC073544.2-201ENST00000601155 540 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AC064872.1-201ENST00000604823 1072 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AC087752.4-201ENST00000605911 462 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AC130324.3-201ENST00000614165 542 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 Z99571.1-201ENST00000636677 394 ntBASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC197Q8NCU1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.59□□□□□ -2
CCDC197Q8NCU1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC197Q8NCU1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.59□□□□□ -2
CCDC197Q8NCU1 AC026241.1-201ENST00000517873 2142 ntBASIC2.59□□□□□ -2
CCDC197Q8NCU1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC197Q8NCU1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -2
CCDC197Q8NCU1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC197Q8NCU1 SNORA70.2-201ENST00000364506 135 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 RNU1-138P-201ENST00000384093 164 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 RNU6-190P-201ENST00000384154 102 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 U3.37-201ENST00000408528 213 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.58□□□□□ -2
CCDC197Q8NCU1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.58□□□□□ -2
CCDC197Q8NCU1 AL109913.1-201ENST00000421173 514 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 RSL24D1P6-201ENST00000426934 401 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 ISCA1P6-201ENST00000427740 390 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 AC005300.1-201ENST00000428401 373 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 HMGB1P9-201ENST00000429856 646 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 RPS15AP5-201ENST00000436276 388 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 AC073614.1-201ENST00000438690 650 ntBASIC2.58□□□□□ -2
CCDC197Q8NCU1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC197Q8NCU1 AP000936.2-201ENST00000447151 681 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms