Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AL109809.4-201ENST00000603520 2185 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AC092354.1-201ENST00000606057 376 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 MIR15A-201ENST00000607334 83 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AC069294.1-201ENST00000608397 350 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC89Q8N998 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC89Q8N998 HMGB1P24-202ENST00000615653 685 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AL355493.4-201ENST00000618530 292 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC89Q8N998 AC009487.2-201ENST00000420969 6821 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC89Q8N998 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC89Q8N998 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC89Q8N998 RNU6-486P-201ENST00000363116 107 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 RNU4-1-201ENST00000363925 141 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 SNORA40C-201ENST00000391285 128 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 Y_RNA.598-201ENST00000410480 95 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 AC092809.3-201ENST00000415453 231 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 AL078601.1-201ENST00000444542 271 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 FABP5P13-201ENST00000452144 328 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 KATNBL1P6-201ENST00000453433 915 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 BTF3P15-201ENST00000455606 336 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 RPS3AP22-201ENST00000488297 769 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 RPL22P13-201ENST00000493291 347 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 MRPS33P3-201ENST00000513456 322 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 AC106038.2-201ENST00000520706 568 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC89Q8N998 MIR5571-201ENST00000577998 113 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 AL627309.6-201ENST00000606857 840 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 AC012360.2-201ENST00000609349 391 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 AL360219.1-201ENST00000610230 366 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 AL020991.1-201ENST00000612314 373 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 MIR7112-201ENST00000616126 65 ntBASIC3.05□□□□□ -1.92
CCDC89Q8N998 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC89Q8N998 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC89Q8N998 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC89Q8N998 ASNSP3-201ENST00000451989 1306 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC89Q8N998 RNU1-35P-201ENST00000362782 153 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 RNU6-553P-201ENST00000364047 96 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 RNU6-395P-201ENST00000365662 106 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC89Q8N998 U6atac.2-201ENST00000408644 118 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 HMGN2P35-201ENST00000412164 270 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 ELOCP4-201ENST00000420090 333 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC89Q8N998 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC89Q8N998 RPS29P6-201ENST00000438196 145 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 PRSS3P4-201ENST00000453323 162 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 SNRPFP4-201ENST00000456366 242 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 AP001324.2-201ENST00000461163 319 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 RPL23AP11-201ENST00000475260 469 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 AC023194.1-201ENST00000493084 308 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 Y_RNA.672-201ENST00000516289 104 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CCDC89Q8N998 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC89Q8N998 RPL21P5-201ENST00000554662 472 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 MIR4658-201ENST00000584344 65 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 HMGN1P30-201ENST00000589286 268 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 AC008739.3-201ENST00000603262 127 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 AC090115.4-201ENST00000609970 188 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 AL359547.2-201ENST00000615810 418 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CCDC89Q8N998 AC009159.2-201ENST00000617603 606 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 AF246928.1-201ENST00000623768 87 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 AC008993.2-201ENST00000631744 806 ntBASIC3.04□□□□□ -1.92
CCDC89Q8N998 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CCDC89Q8N998 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC89Q8N998 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC89Q8N998 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
CCDC89Q8N998 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CCDC89Q8N998 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC89Q8N998 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC89Q8N998 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CCDC89Q8N998 MTND4P4-201ENST00000439033 1366 ntBASIC3.03□□□□□ -1.92
CCDC89Q8N998 RNU6-898P-201ENST00000365627 104 ntBASIC3.03□□□□□ -1.92
CCDC89Q8N998 MIR7-3-201ENST00000384898 110 ntBASIC3.03□□□□□ -1.92
CCDC89Q8N998 RNA5SP120-201ENST00000410900 112 ntBASIC3.03□□□□□ -1.92
CCDC89Q8N998 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC89Q8N998 AL365203.2-201ENST00000423444 196 ntBASIC3.03□□□□□ -1.92
CCDC89Q8N998 SUMO1P4-201ENST00000429430 302 ntBASIC3.03□□□□□ -1.92
CCDC89Q8N998 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC89Q8N998 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC89Q8N998 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC89Q8N998 AC117440.1-201ENST00000474107 571 ntBASIC3.03□□□□□ -1.92
CCDC89Q8N998 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC89Q8N998 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms