Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MIR1321-201ENST00000637766 79 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 FAM35CP-201ENST00000554755 2470 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
VPS52Q8N1B4 MTND5P17-201ENST00000418405 1603 ntBASIC3.55□□□□□ -1.84
VPS52Q8N1B4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 RNU6-188P-201ENST00000364207 107 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 Y_RNA.248-201ENST00000364501 109 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 Y_RNA.256-201ENST00000364594 104 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 RNU4-48P-201ENST00000365559 182 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 SNORD115-47-201ENST00000391226 86 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AC068050.1-201ENST00000394891 380 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 NDUFS5P1-201ENST00000405668 289 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 SDCBPP3-201ENST00000419629 891 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AL451054.2-201ENST00000420896 202 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 RPL23AP82-202ENST00000427528 469 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 RBMX2P4-201ENST00000441256 376 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 RNU6-420P-201ENST00000458780 107 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AC109925.1-201ENST00000478069 331 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 RPL36AP51-201ENST00000487216 318 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AC006445.1-201ENST00000491925 405 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 MTND4LP22-201ENST00000508209 276 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AC117522.1-201ENST00000509821 380 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 RNU6-390P-201ENST00000516259 103 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 SNORA70.16-201ENST00000516390 95 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 SCARNA15.2-201ENST00000516409 127 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AC109635.3-201ENST00000529536 185 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AL355836.1-201ENST00000555951 870 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 RPL23AP84-201ENST00000571193 464 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 LARP7P3-201ENST00000579888 337 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AC007621.1-201ENST00000604544 437 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AP001596.2-201ENST00000608410 312 ntBASIC3.54□□□□□ -1.84
VPS52Q8N1B4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS52Q8N1B4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 ZNF807-201ENST00000328088 1707 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 MIR422A-201ENST00000362286 90 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 RNU6-1283P-201ENST00000365314 105 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 RNU6-805P-201ENST00000365643 106 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 RNU6-1158P-201ENST00000391167 107 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 MIR1277-201ENST00000408536 78 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 MIR1290-201ENST00000408735 78 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 RNU2-9P-201ENST00000410194 145 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 RN7SKP140-201ENST00000411196 284 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 OR51A5P-201ENST00000415429 942 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 NDUFB4P7-201ENST00000423198 363 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 RPL27AP8-201ENST00000424277 446 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 RPL21P40-201ENST00000428586 483 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 MRPS10P2-201ENST00000431226 381 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AC125238.1-201ENST00000448842 249 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 RPS20P20-201ENST00000460498 340 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 MRPS17P3-201ENST00000465453 385 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 HMGN2P13-201ENST00000476476 274 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AC116562.3-201ENST00000506136 177 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AL359273.1-201ENST00000510918 627 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 SNORA40.12-201ENST00000516329 111 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AC068587.5-201ENST00000528506 175 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AC092325.1-201ENST00000566449 554 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AC006504.3-201ENST00000586818 523 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AC093788.1-201ENST00000609356 927 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms