Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 HIGD1AP2-201ENST00000446367 280 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 RPL21P13-201ENST00000488305 481 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 RNU6-27P-201ENST00000516146 107 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 RNU6-914P-201ENST00000516749 109 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 Y_RNA.712-201ENST00000517011 92 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 AP001328.1-201ENST00000528550 176 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 AC024153.1-201ENST00000603103 365 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 MIR6853-201ENST00000619642 74 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 CR381572.2-201ENST00000624852 397 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 AL031119.1-201ENST00000404707 1879 ntBASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NPAS3Q8IXF0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 OR1L6-202ENST00000373684 1044 ntBASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 AC068538.1-201ENST00000376856 336 ntBASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 AC073587.1-201ENST00000447093 876 ntBASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 RN7SL441P-201ENST00000492388 296 ntBASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 ENPP7P9-201ENST00000514456 627 ntBASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 RNU6-65P-201ENST00000516332 98 ntBASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 MIR3145-201ENST00000580727 82 ntBASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 AC068647.2-201ENST00000637380 353 ntBASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.12□□□□□ -1.59
NPAS3Q8IXF0 AC100778.3-201ENST00000580060 1750 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 AL590240.1-201ENST00000334118 313 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 RNU4-80P-201ENST00000363200 141 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 RNA5SP173-201ENST00000364857 136 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 COX6CP13-201ENST00000428703 226 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 USP9YP7-201ENST00000436723 430 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 RPL23AP33-201ENST00000442301 452 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 USP9YP32-201ENST00000452432 430 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 RPS5P7-201ENST00000456664 608 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 RPS23P7-201ENST00000466210 444 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 AC092991.1-201ENST00000477176 376 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 RNU6-567P-201ENST00000516746 107 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 AC019206.1-201ENST00000621938 425 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 AC092376.2-201ENST00000622621 4116 ntBASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
NPAS3Q8IXF0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 AC005005.4-201ENST00000623789 16698 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 Y_RNA.294-201ENST00000364916 102 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 RNU6-245P-201ENST00000384020 107 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 UBA52P6-201ENST00000399822 382 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 AL035079.1-201ENST00000405210 287 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 AL591034.1-201ENST00000407447 340 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 SNORA11-201ENST00000408789 128 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 AC114755.2-201ENST00000413520 361 ntBASIC5.1□□□□□ -1.59
NPAS3Q8IXF0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms