Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MIR9-3-201ENST00000385084 90 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 MIR764-201ENST00000390811 85 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 MTCO1P56-201ENST00000401674 224 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.51□□□□□ -2.17
LRRC28Q86X40 CYCSP49-201ENST00000420810 319 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 AL590383.1-201ENST00000428602 75 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.51□□□□□ -2.17
LRRC28Q86X40 PTGES3P1-201ENST00000439531 483 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.51□□□□□ -2.17
LRRC28Q86X40 DDX3P2-201ENST00000446138 111 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.51□□□□□ -2.17
LRRC28Q86X40 AP1S2P1-201ENST00000457344 379 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.51□□□□□ -2.17
LRRC28Q86X40 AC138853.1-201ENST00000503549 823 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.51□□□□□ -2.17
LRRC28Q86X40 AC091965.2-201ENST00000512324 613 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.51□□□□□ -2.17
LRRC28Q86X40 RNU5F-8P-201ENST00000515941 111 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.51□□□□□ -2.17
LRRC28Q86X40 AC022861.1-201ENST00000522981 663 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.51□□□□□ -2.17
LRRC28Q86X40 AP005639.2-201ENST00000527592 928 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 AP003497.1-201ENST00000528472 562 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.51□□□□□ -2.17
LRRC28Q86X40 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.51□□□□□ -2.17
LRRC28Q86X40 AC023825.1-201ENST00000566704 1030 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 AC104581.2-201ENST00000572227 430 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 MIR3199-1-201ENST00000582434 88 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 MIR3124-201ENST00000582636 67 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 AC007038.2-201ENST00000608095 740 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 AC008759.3-201ENST00000613300 508 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 MTND1P37-201ENST00000636562 264 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 AC006927.2-201ENST00000639256 389 ntBASIC1.51□□□□□ -2.17
LRRC28Q86X40 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
LRRC28Q86X40 RNA5SP125-201ENST00000364843 120 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 RNU6-359P-201ENST00000365466 108 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 RPL7P27-201ENST00000403775 720 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 RNU2-33P-201ENST00000410344 192 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 BTF3P8-201ENST00000414577 526 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.5□□□□□ -2.17
LRRC28Q86X40 AL109913.1-201ENST00000421173 514 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC003685.2-201ENST00000422795 395 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.5□□□□□ -2.17
LRRC28Q86X40 USP9YP15-201ENST00000442391 422 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 MTCYBP42-201ENST00000444653 1130 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.5□□□□□ -2.17
LRRC28Q86X40 MRPS17P3-201ENST00000465453 385 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 RPS20P22-201ENST00000473700 357 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC114981.1-201ENST00000503897 678 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC104417.1-201ENST00000523974 751 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 SLC2A13P1-201ENST00000531560 322 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.5□□□□□ -2.17
LRRC28Q86X40 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC243960.4-201ENST00000600532 288 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.5□□□□□ -2.17
LRRC28Q86X40 AL445435.1-201ENST00000604232 665 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC069545.1-201ENST00000605671 358 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AL158211.4-201ENST00000606988 584 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 DUXAP10-204ENST00000612052 616 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC013476.2-201ENST00000614456 459 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AL357080.1-201ENST00000617394 239 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC008443.7-201ENST00000622195 246 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC084768.2-201ENST00000622736 221 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC109454.4-201ENST00000623411 649 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 AC091948.2-201ENST00000636510 279 ntBASIC1.5□□□□□ -2.17
LRRC28Q86X40 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LRRC28Q86X40 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
LRRC28Q86X40 RNU6-1159P-201ENST00000362933 107 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 RNU1-148P-201ENST00000384472 162 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 AL603865.2-201ENST00000401679 213 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 VN1R36P-201ENST00000414936 291 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.49□□□□□ -2.17
LRRC28Q86X40 USP9YP21-201ENST00000420603 432 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.49□□□□□ -2.17
LRRC28Q86X40 MTCO2P5-201ENST00000422621 426 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 AL139421.1-201ENST00000423010 169 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.49□□□□□ -2.17
LRRC28Q86X40 DNAJC19P4-201ENST00000440115 345 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.49□□□□□ -2.17
LRRC28Q86X40 RPL18AP17-201ENST00000455326 198 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 HMGN2P23-201ENST00000456759 269 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.49□□□□□ -2.17
LRRC28Q86X40 RNU1-98P-201ENST00000458992 160 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 RPS29P11-201ENST00000496507 171 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LRRC28Q86X40 HMGB1P28-201ENST00000507778 552 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 MTND2P31-201ENST00000512602 616 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.49□□□□□ -2.17
LRRC28Q86X40 RNU6-970P-201ENST00000516312 107 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 DEFB130C-202ENST00000530001 230 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.49□□□□□ -2.17
LRRC28Q86X40 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.49□□□□□ -2.17
LRRC28Q86X40 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.49□□□□□ -2.17
LRRC28Q86X40 AL359212.1-201ENST00000556608 614 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.49□□□□□ -2.17
LRRC28Q86X40 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.49□□□□□ -2.17
LRRC28Q86X40 AC099785.1-201ENST00000605697 437 ntBASIC1.49□□□□□ -2.17
LRRC28Q86X40 AC025754.2-201ENST00000606491 432 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms