Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3□□□□□ -1.93
LDB1Q86U70 AC093392.2-201ENST00000450682 337 ntBASIC3□□□□□ -1.93
LDB1Q86U70 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3□□□□□ -1.93
LDB1Q86U70 AC022364.2-201ENST00000457963 554 ntBASIC3□□□□□ -1.93
LDB1Q86U70 RPL21P41-201ENST00000459863 264 ntBASIC3□□□□□ -1.93
LDB1Q86U70 AC104472.2-201ENST00000469035 601 ntBASIC3□□□□□ -1.93
LDB1Q86U70 AC006483.1-201ENST00000487308 313 ntBASIC3□□□□□ -1.93
LDB1Q86U70 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3□□□□□ -1.93
LDB1Q86U70 AC108078.2-201ENST00000510750 236 ntBASIC3□□□□□ -1.93
LDB1Q86U70 SNORA70.24-201ENST00000517233 118 ntBASIC3□□□□□ -1.93
LDB1Q86U70 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3□□□□□ -1.93
LDB1Q86U70 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3□□□□□ -1.93
LDB1Q86U70 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3□□□□□ -1.93
LDB1Q86U70 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3□□□□□ -1.93
LDB1Q86U70 AP001646.1-201ENST00000527936 915 ntBASIC3□□□□□ -1.93
LDB1Q86U70 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3□□□□□ -1.93
LDB1Q86U70 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3□□□□□ -1.93
LDB1Q86U70 AC009063.1-201ENST00000563342 702 ntBASIC3□□□□□ -1.93
LDB1Q86U70 AC024619.4-201ENST00000580924 316 ntBASIC3□□□□□ -1.93
LDB1Q86U70 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3□□□□□ -1.93
LDB1Q86U70 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3□□□□□ -1.93
LDB1Q86U70 YPEL5P2-201ENST00000605553 359 ntBASIC3□□□□□ -1.93
LDB1Q86U70 HULC.1-201ENST00000612720 240 ntBASIC3□□□□□ -1.93
LDB1Q86U70 AL359547.2-201ENST00000615810 418 ntBASIC3□□□□□ -1.93
LDB1Q86U70 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3□□□□□ -1.93
LDB1Q86U70 DLEU1_1.1-201ENST00000618107 190 ntBASIC3□□□□□ -1.93
LDB1Q86U70 AC009161.2-201ENST00000624626 138 ntBASIC3□□□□□ -1.93
LDB1Q86U70 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3□□□□□ -1.93
LDB1Q86U70 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3□□□□□ -1.93
LDB1Q86U70 MIR622-201ENST00000638396 96 ntBASIC3□□□□□ -1.93
LDB1Q86U70 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
LDB1Q86U70 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
LDB1Q86U70 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LDB1Q86U70 RNU6-179P-201ENST00000363350 107 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 Y_RNA.296-201ENST00000364930 108 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 Y_RNA.367-201ENST00000365544 101 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 DYNLT3P1-201ENST00000378574 347 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 GSTA9P-201ENST00000406231 611 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.99□□□□□ -1.93
LDB1Q86U70 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.99□□□□□ -1.93
LDB1Q86U70 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB1Q86U70 MTCO3P41-201ENST00000414801 328 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 AC092809.3-201ENST00000415453 231 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB1Q86U70 AC010975.2-201ENST00000427781 588 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 DLGAP5P1-201ENST00000430307 464 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.99□□□□□ -1.93
LDB1Q86U70 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.99□□□□□ -1.93
LDB1Q86U70 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB1Q86U70 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB1Q86U70 AC233702.1-201ENST00000482905 502 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 RPS15AP34-201ENST00000487776 387 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
LDB1Q86U70 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.99□□□□□ -1.93
LDB1Q86U70 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB1Q86U70 AC091133.4-201ENST00000511142 308 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 RNU6-914P-201ENST00000516749 109 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 AC009812.2-201ENST00000517657 457 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB1Q86U70 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB1Q86U70 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.99□□□□□ -1.93
LDB1Q86U70 ADI1P3-201ENST00000549509 470 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB1Q86U70 DNAJC8P1-201ENST00000554535 372 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 SUB1P2-201ENST00000556401 297 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 AL391261.3-201ENST00000557194 520 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB1Q86U70 AGGF1P4-201ENST00000568249 801 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB1Q86U70 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB1Q86U70 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.99□□□□□ -1.93
LDB1Q86U70 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB1Q86U70 AC004223.2-201ENST00000590309 544 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 Z84480.1-201ENST00000605131 311 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 DUSP12P1-201ENST00000612874 516 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 AC004852.3-201ENST00000614131 326 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 AC093648.1-201ENST00000623546 606 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 MIR3651-201ENST00000630427 90 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 Z99571.1-201ENST00000636677 394 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 MTND5P17-201ENST00000418405 1603 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 AC092447.7-201ENST00000422212 1621 ntBASIC2.99□□□□□ -1.93
LDB1Q86U70 RNU6-799P-201ENST00000363567 107 ntBASIC2.98□□□□□ -1.93
LDB1Q86U70 RNU6-884P-201ENST00000363889 107 ntBASIC2.98□□□□□ -1.93
LDB1Q86U70 RNU6-259P-201ENST00000383999 107 ntBASIC2.98□□□□□ -1.93
LDB1Q86U70 Y_RNA.534-201ENST00000384599 112 ntBASIC2.98□□□□□ -1.93
LDB1Q86U70 MIR1-2-201ENST00000384961 85 ntBASIC2.98□□□□□ -1.93
LDB1Q86U70 MIR301A-201ENST00000385261 86 ntBASIC2.98□□□□□ -1.93
LDB1Q86U70 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
LDB1Q86U70 RNA5SP274-201ENST00000410484 108 ntBASIC2.98□□□□□ -1.93
LDB1Q86U70 RNU6-387P-201ENST00000411331 105 ntBASIC2.98□□□□□ -1.93
LDB1Q86U70 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LDB1Q86U70 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.98□□□□□ -1.93
LDB1Q86U70 AC080125.1-201ENST00000414888 684 ntBASIC2.98□□□□□ -1.93
LDB1Q86U70 SDCBPP3-201ENST00000419629 891 ntBASIC2.98□□□□□ -1.93
LDB1Q86U70 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.98□□□□□ -1.93
LDB1Q86U70 AL591704.1-201ENST00000432574 275 ntBASIC2.98□□□□□ -1.93
LDB1Q86U70 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.98□□□□□ -1.93
LDB1Q86U70 RNU7-23P-201ENST00000459465 62 ntBASIC2.98□□□□□ -1.93
LDB1Q86U70 AC117440.1-201ENST00000474107 571 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms