Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SFR1P1-201ENST00000403720 688 ntBASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 AC004022.2-201ENST00000413824 193 ntBASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 RNU6-229P-201ENST00000516614 102 ntBASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 PRR13P7-201ENST00000605538 430 ntBASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 AC024595.1-201ENST00000623088 387 ntBASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 MIR4496-201ENST00000635896 61 ntBASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 MTATP6P7-201ENST00000453315 681 ntBASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 AC117454.1-201ENST00000491120 168 ntBASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 AC114786.4-201ENST00000508771 728 ntBASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 AC093770.1-201ENST00000511559 571 ntBASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 AC114797.1-201ENST00000514003 728 ntBASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.41□□□□□ -2.34
VPS13BQ7Z7G8 MIR126-201ENST00000362291 85 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 VN1R36P-201ENST00000414936 291 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 AC010099.1-201ENST00000455434 375 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 snoU109.1-201ENST00000459339 135 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 MIR5571-201ENST00000577998 113 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 AC022387.2-201ENST00000604050 448 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 MIR6086-201ENST00000638065 55 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 MTND4P12-201ENST00000498999 1377 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 AL606495.1-201ENST00000422100 813 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 AC008379.1-201ENST00000463655 464 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 AL161423.1-201ENST00000613700 262 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 RNU4-42P-201ENST00000364738 142 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 RNA5SP331-201ENST00000364986 107 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 RNU4-31P-201ENST00000384211 141 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 SSXP10-201ENST00000402595 565 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 AC000111.3-201ENST00000433478 193 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 RNU5F-8P-201ENST00000515941 111 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 SNORA48.11-201ENST00000517015 89 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 AC005786.1-201ENST00000588553 154 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 MIR6866-201ENST00000638146 69 ntBASIC0.4□□□□□ -2.35
VPS13BQ7Z7G8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 AC123912.3-201ENST00000600907 1367 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 SNORD26-201ENST00000384147 75 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 MTND5P15-201ENST00000434246 349 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 AC118273.2-201ENST00000532092 465 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 MTND4LP5-201ENST00000605152 292 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 MIR7515-201ENST00000637837 67 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 RNA5SP347-201ENST00000362445 119 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 BTF3L4P2-201ENST00000392798 346 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 SNORD14A-201ENST00000606526 91 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 RNA5SP252-201ENST00000391131 119 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 MRPS36P1-201ENST00000421291 307 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 TPTE2P6-202ENST00000445572 1007 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 TRGVB-201ENST00000453257 471 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 KLF3P2-201ENST00000465138 268 ntBASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.39□□□□□ -2.35
VPS13BQ7Z7G8 SNORA16B-201ENST00000364674 135 ntBASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 RPL23AP35-201ENST00000451906 501 ntBASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 AL592148.2-201ENST00000612210 372 ntBASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 FRG1HP-204ENST00000617940 757 ntBASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 RPS3AP24-201ENST00000407896 734 ntBASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 ARPC3P5-201ENST00000448802 534 ntBASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 AGGF1P5-201ENST00000567900 919 ntBASIC0.38□□□□□ -2.35
VPS13BQ7Z7G8 MIR3198-2-201ENST00000577868 80 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms