Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.12□□□□□ -1.91
NPHP3Q7Z494 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.12□□□□□ -1.91
NPHP3Q7Z494 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.12□□□□□ -1.91
NPHP3Q7Z494 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.12□□□□□ -1.91
NPHP3Q7Z494 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.12□□□□□ -1.91
NPHP3Q7Z494 Y_RNA.688-201ENST00000516565 95 ntBASIC3.12□□□□□ -1.91
NPHP3Q7Z494 AC060788.1-201ENST00000521318 469 ntBASIC3.12□□□□□ -1.91
NPHP3Q7Z494 OR5BN1P-201ENST00000532955 829 ntBASIC3.12□□□□□ -1.91
NPHP3Q7Z494 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.12□□□□□ -1.91
NPHP3Q7Z494 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.12□□□□□ -1.91
NPHP3Q7Z494 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.12□□□□□ -1.91
NPHP3Q7Z494 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.12□□□□□ -1.91
NPHP3Q7Z494 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.12□□□□□ -1.91
NPHP3Q7Z494 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.12□□□□□ -1.91
NPHP3Q7Z494 BX664608.1-201ENST00000610519 487 ntBASIC3.12□□□□□ -1.91
NPHP3Q7Z494 AC027807.2-201ENST00000616099 408 ntBASIC3.12□□□□□ -1.91
NPHP3Q7Z494 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.12□□□□□ -1.91
NPHP3Q7Z494 AC091965.5-201ENST00000624785 342 ntBASIC3.12□□□□□ -1.91
NPHP3Q7Z494 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.12□□□□□ -1.91
NPHP3Q7Z494 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NPHP3Q7Z494 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
NPHP3Q7Z494 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPHP3Q7Z494 SNORD116-2-201ENST00000384274 95 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 RNU6-809P-201ENST00000384461 107 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 SNORD116-6-201ENST00000384711 96 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 U3.20-201ENST00000390909 217 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 SNORA26.8-201ENST00000391306 124 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.11□□□□□ -1.91
NPHP3Q7Z494 PPP1R11P2-201ENST00000423543 382 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AL356867.1-201ENST00000429623 299 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC007677.1-201ENST00000445757 515 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC093392.2-201ENST00000450682 337 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 MTND2P24-201ENST00000453434 806 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC109486.1-201ENST00000486833 374 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC006483.1-201ENST00000487308 313 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 RPL30P5-201ENST00000494923 336 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC103988.1-201ENST00000566382 2177 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPHP3Q7Z494 MIR3609-201ENST00000582661 80 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 GLUD1P4-201ENST00000590914 418 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC010620.1-201ENST00000601088 1102 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC112187.2-201ENST00000604345 283 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC105129.3-201ENST00000605455 485 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC012150.2-201ENST00000621300 544 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC112204.3-201ENST00000623822 332 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AP003122.6-201ENST00000623831 495 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 AC093591.3-201ENST00000634516 308 ntBASIC3.11□□□□□ -1.91
NPHP3Q7Z494 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPHP3Q7Z494 TPTE2P4-201ENST00000258589 1605 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPHP3Q7Z494 RNU5F-7P-201ENST00000363696 115 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 MIR221-201ENST00000385135 110 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 AL591416.1-201ENST00000404015 867 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 MIR1302-8-201ENST00000408342 128 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.1□□□□□ -1.91
NPHP3Q7Z494 UBE2V1P13-201ENST00000436983 439 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 RPL21P2-201ENST00000440049 481 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.1□□□□□ -1.91
NPHP3Q7Z494 AC008571.1-201ENST00000467232 300 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NPHP3Q7Z494 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.1□□□□□ -1.91
NPHP3Q7Z494 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.1□□□□□ -1.91
NPHP3Q7Z494 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.1□□□□□ -1.91
NPHP3Q7Z494 AC025881.1-201ENST00000518851 512 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.1□□□□□ -1.91
NPHP3Q7Z494 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.1□□□□□ -1.91
NPHP3Q7Z494 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.1□□□□□ -1.91
NPHP3Q7Z494 DNAJC8P1-201ENST00000554535 372 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.1□□□□□ -1.91
NPHP3Q7Z494 AC105137.2-201ENST00000569073 466 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 MIR548AB-201ENST00000584917 84 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 AC092354.1-201ENST00000606057 376 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 AL359198.2-201ENST00000611836 194 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 AL159972.1-201ENST00000625150 448 ntBASIC3.1□□□□□ -1.91
NPHP3Q7Z494 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPHP3Q7Z494 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NPHP3Q7Z494 Y_RNA.140-201ENST00000363474 103 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 RNU6-799P-201ENST00000363567 107 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 RNU6-1027P-201ENST00000383998 107 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 SNORA67.3-201ENST00000384366 140 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 MIR514A1-201ENST00000385133 98 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 RPS20P2-201ENST00000402520 389 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 AC078974.1-201ENST00000411597 223 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 AC018630.2-202ENST00000422992 927 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 RPL7L1P10-201ENST00000427790 463 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.09□□□□□ -1.91
NPHP3Q7Z494 AL590383.1-201ENST00000428602 75 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 MED14P1-201ENST00000430517 648 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.09□□□□□ -1.91
NPHP3Q7Z494 AC109583.1-201ENST00000432156 268 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 RPS15AP28-201ENST00000435088 386 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 MTND2P4-201ENST00000445034 1004 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 AC009237.8-201ENST00000445492 379 ntBASIC3.09□□□□□ -1.91
NPHP3Q7Z494 COX6CP12-201ENST00000446748 202 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms