Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU6-1167P-201ENST00000363227 94 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 RNA5SP428-201ENST00000365129 132 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 SNORA46.1-201ENST00000391069 153 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 AL078599.1-201ENST00000402075 293 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 Y_RNA.597-201ENST00000410463 100 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 RPL23AP26-201ENST00000412728 464 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 AC024067.1-201ENST00000426199 223 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 PSMD10P3-201ENST00000437000 448 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 MRPS10P1-201ENST00000448483 130 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 RN7SL244P-201ENST00000493405 297 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 RNA5SP272-201ENST00000516095 111 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 RNA5SP464-201ENST00000516251 108 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 SNORD116-25-201ENST00000516517 92 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 AC006349.1-201ENST00000555526 235 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 AL161798.1-201ENST00000604630 131 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 AL109809.4-201ENST00000603520 2185 ntBASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LYSMD3Q7Z3D4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 AC233981.2-201ENST00000611524 1614 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 Y_RNA.136-201ENST00000363444 102 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 MIR10A-201ENST00000385043 110 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 OR2AH1P-201ENST00000425717 928 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 AP000907.1-201ENST00000428428 510 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 AL450023.3-201ENST00000440592 271 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 AC009296.1-201ENST00000443146 155 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 GEMIN8P3-201ENST00000445417 720 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 AL691482.1-201ENST00000453255 87 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 RPL26P26-201ENST00000480251 434 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 Y_RNA.719-201ENST00000517156 106 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 MIR4436B2-201ENST00000581415 91 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 MIR4436B1-201ENST00000583272 91 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LYSMD3Q7Z3D4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 RNA5SP361-201ENST00000362686 118 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 RNU6-818P-201ENST00000364837 108 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 Y_RNA.570-201ENST00000384750 101 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 AL357139.1-201ENST00000407792 426 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 AL627311.1-201ENST00000431514 115 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 AC009237.7-201ENST00000447357 229 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 snoU13.20-201ENST00000459180 104 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 PPIAP21-201ENST00000464473 501 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 AC117440.1-201ENST00000474107 571 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 RNU6-377P-201ENST00000515965 102 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 MIR6748-201ENST00000610433 71 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 SCARNA4-201ENST00000629045 128 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 MAPK10-349ENST00000641767 3661 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 AL079305.1-201ENST00000623159 3008 ntBASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LYSMD3Q7Z3D4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LYSMD3Q7Z3D4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LYSMD3Q7Z3D4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
LYSMD3Q7Z3D4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5□□□□□ -1.61
LYSMD3Q7Z3D4 RNU6-626P-201ENST00000363354 107 ntBASIC5□□□□□ -1.61
LYSMD3Q7Z3D4 RNU6-336P-201ENST00000364891 107 ntBASIC5□□□□□ -1.61
LYSMD3Q7Z3D4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5□□□□□ -1.61
LYSMD3Q7Z3D4 Y_RNA.571-201ENST00000384753 98 ntBASIC5□□□□□ -1.61
LYSMD3Q7Z3D4 RNA5SP213-201ENST00000391031 106 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms