Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC104763.3-201ENST00000613765 618 ntBASIC0.35□□□□□ -2.35
VPS13CQ709C8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
VPS13CQ709C8 AC096533.1-201ENST00000411645 353 ntBASIC0.35□□□□□ -2.35
VPS13CQ709C8 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.35□□□□□ -2.35
VPS13CQ709C8 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.35□□□□□ -2.35
VPS13CQ709C8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.35□□□□□ -2.35
VPS13CQ709C8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.35□□□□□ -2.35
VPS13CQ709C8 AL121578.1-201ENST00000428051 892 ntBASIC0.35□□□□□ -2.35
VPS13CQ709C8 MTND6P13-201ENST00000443510 523 ntBASIC0.35□□□□□ -2.35
VPS13CQ709C8 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
VPS13CQ709C8 CBX3P3-201ENST00000508108 532 ntBASIC0.35□□□□□ -2.35
VPS13CQ709C8 AC136932.1-201ENST00000574771 208 ntBASIC0.35□□□□□ -2.35
VPS13CQ709C8 MIR92A1-201ENST00000385233 78 ntBASIC0.34□□□□□ -2.35
VPS13CQ709C8 RPS25P9-201ENST00000435591 252 ntBASIC0.34□□□□□ -2.35
VPS13CQ709C8 RPS27P22-201ENST00000478056 241 ntBASIC0.34□□□□□ -2.35
VPS13CQ709C8 AC108676.2-201ENST00000605225 163 ntBASIC0.34□□□□□ -2.35
VPS13CQ709C8 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.34□□□□□ -2.35
VPS13CQ709C8 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
VPS13CQ709C8 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.34□□□□□ -2.35
VPS13CQ709C8 SNORA22-201ENST00000383907 134 ntBASIC0.34□□□□□ -2.35
VPS13CQ709C8 SNORA22C-201ENST00000384614 134 ntBASIC0.34□□□□□ -2.35
VPS13CQ709C8 RNU6-939P-201ENST00000384634 107 ntBASIC0.34□□□□□ -2.35
VPS13CQ709C8 MIR147B-201ENST00000390185 80 ntBASIC0.34□□□□□ -2.35
VPS13CQ709C8 AL031577.2-201ENST00000404133 280 ntBASIC0.34□□□□□ -2.35
VPS13CQ709C8 AL356432.1-201ENST00000405809 419 ntBASIC0.34□□□□□ -2.35
VPS13CQ709C8 XKRYP1-201ENST00000423438 492 ntBASIC0.34□□□□□ -2.35
VPS13CQ709C8 XKRYP2-201ENST00000432915 492 ntBASIC0.34□□□□□ -2.35
VPS13CQ709C8 AP006587.4-201ENST00000526053 529 ntBASIC0.34□□□□□ -2.35
VPS13CQ709C8 RPL30P13-201ENST00000418873 348 ntBASIC0.34□□□□□ -2.36
VPS13CQ709C8 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.34□□□□□ -2.36
VPS13CQ709C8 AC097493.1-201ENST00000463958 372 ntBASIC0.34□□□□□ -2.36
VPS13CQ709C8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.34□□□□□ -2.36
VPS13CQ709C8 AC006249.1-201ENST00000621223 471 ntBASIC0.34□□□□□ -2.36
VPS13CQ709C8 RNU6-700P-201ENST00000391043 107 ntBASIC0.33□□□□□ -2.36
VPS13CQ709C8 MRPL35P3-201ENST00000421557 364 ntBASIC0.33□□□□□ -2.36
VPS13CQ709C8 FAM206BP-201ENST00000510179 541 ntBASIC0.33□□□□□ -2.36
VPS13CQ709C8 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.33□□□□□ -2.36
VPS13CQ709C8 AC008945.2-201ENST00000606056 604 ntBASIC0.33□□□□□ -2.36
VPS13CQ709C8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.33□□□□□ -2.36
VPS13CQ709C8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
VPS13CQ709C8 RNU6-1187P-201ENST00000364771 110 ntBASIC0.33□□□□□ -2.36
VPS13CQ709C8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.33□□□□□ -2.36
VPS13CQ709C8 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.33□□□□□ -2.36
VPS13CQ709C8 MIR4512-201ENST00000583257 77 ntBASIC0.33□□□□□ -2.36
VPS13CQ709C8 AL136313.1-201ENST00000624804 202 ntBASIC0.33□□□□□ -2.36
VPS13CQ709C8 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
VPS13CQ709C8 RNU6-1180P-201ENST00000364935 107 ntBASIC0.33□□□□□ -2.36
VPS13CQ709C8 MIR32-201ENST00000384965 70 ntBASIC0.33□□□□□ -2.36
VPS13CQ709C8 RPS29P8-201ENST00000445109 171 ntBASIC0.33□□□□□ -2.36
VPS13CQ709C8 AC007834.2-201ENST00000536310 343 ntBASIC0.33□□□□□ -2.36
VPS13CQ709C8 AP001485.1-201ENST00000604799 199 ntBASIC0.33□□□□□ -2.36
VPS13CQ709C8 RPS4XP3-201ENST00000398541 413 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 AC006461.1-201ENST00000412637 326 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 AC093155.1-201ENST00000440164 826 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.32□□□□□ -2.36
VPS13CQ709C8 AC103710.4-201ENST00000609301 899 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 AL592148.2-201ENST00000612210 372 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 AC005332.10-201ENST00000612725 619 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 AC097372.5-201ENST00000623665 376 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 RNU4-73P-201ENST00000363164 141 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.32□□□□□ -2.36
VPS13CQ709C8 PTP4A1P1-201ENST00000420539 515 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 RPL23AP95-201ENST00000426806 265 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.32□□□□□ -2.36
VPS13CQ709C8 LINC00933-203ENST00000559812 219 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 AL357075.2-201ENST00000614906 189 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.32□□□□□ -2.36
VPS13CQ709C8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.32□□□□□ -2.36
VPS13CQ709C8 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.32□□□□□ -2.36
VPS13CQ709C8 RNU6-923P-201ENST00000364753 107 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 SNORD26-201ENST00000384147 75 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 RPS6P14-201ENST00000425165 719 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.32□□□□□ -2.36
VPS13CQ709C8 MTCO1P53-201ENST00000441633 699 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 SNORA3.4-201ENST00000515969 96 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.32□□□□□ -2.36
VPS13CQ709C8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.32□□□□□ -2.36
VPS13CQ709C8 RLIMP2-201ENST00000427891 1563 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 AL391516.1-201ENST00000554380 2449 ntBASIC0.32□□□□□ -2.36
VPS13CQ709C8 MTND5P14-201ENST00000441481 1267 ntBASIC0.31□□□□□ -2.36
VPS13CQ709C8 AC087884.1-201ENST00000469738 328 ntBASIC0.31□□□□□ -2.36
VPS13CQ709C8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.31□□□□□ -2.36
VPS13CQ709C8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
VPS13CQ709C8 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.31□□□□□ -2.36
VPS13CQ709C8 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.31□□□□□ -2.36
VPS13CQ709C8 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.31□□□□□ -2.36
VPS13CQ709C8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.31□□□□□ -2.36
VPS13CQ709C8 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.31□□□□□ -2.36
VPS13CQ709C8 RPL23AP6-201ENST00000446637 472 ntBASIC0.31□□□□□ -2.36
VPS13CQ709C8 AC139453.3-201ENST00000493276 369 ntBASIC0.31□□□□□ -2.36
VPS13CQ709C8 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
VPS13CQ709C8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS13CQ709C8 OSBPL9P3-201ENST00000534523 595 ntBASIC0.31□□□□□ -2.36
VPS13CQ709C8 SNORD84-203ENST00000584275 78 ntBASIC0.31□□□□□ -2.36
VPS13CQ709C8 AC003001.2-201ENST00000616294 831 ntBASIC0.31□□□□□ -2.36
VPS13CQ709C8 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.31□□□□□ -2.36
VPS13CQ709C8 MIR153-2-201ENST00000385225 87 ntBASIC0.31□□□□□ -2.36
VPS13CQ709C8 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.31□□□□□ -2.36
VPS13CQ709C8 AC067940.1-201ENST00000458411 300 ntBASIC0.31□□□□□ -2.36
VPS13CQ709C8 Y_RNA.700-201ENST00000516806 100 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms