Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC144NLQ6NUI1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC144NLQ6NUI1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CCDC144NLQ6NUI1 NCAPGP1-201ENST00000505112 1814 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AC007656.2-201ENST00000624902 4547 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 MIR423-201ENST00000362201 94 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 RNU6-270P-201ENST00000364131 105 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 RN7SKP227-201ENST00000364445 330 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 Y_RNA.301-201ENST00000364990 103 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 Y_RNA.356-201ENST00000365475 113 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 MIR450B-201ENST00000401182 78 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 Y_RNA.623-201ENST00000411128 95 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AC098614.2-201ENST00000426040 255 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AC007560.1-201ENST00000426912 237 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 MTND3P23-201ENST00000431980 347 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AC091390.1-201ENST00000433904 331 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 NDUFB1P2-201ENST00000449477 176 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AL136097.1-201ENST00000456945 913 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 RPL7P43-201ENST00000478876 753 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AC011005.2-201ENST00000487324 359 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 RNU6-256P-201ENST00000516747 97 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 RNU7-143P-201ENST00000516781 65 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AL360157.1-201ENST00000565962 87 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AC128687.2-201ENST00000609657 566 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AC064801.1-201ENST00000612025 407 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AL133216.2-202ENST00000634512 349 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 U2.21-201ENST00000637295 81 ntBASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC144NLQ6NUI1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 Y_RNA.184-201ENST00000363884 108 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 RNU6-884P-201ENST00000363889 107 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 RNU6-384P-201ENST00000364900 104 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 Y_RNA.324-201ENST00000365165 102 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 RNU6-166P-201ENST00000384371 107 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 Y_RNA.529-201ENST00000384586 119 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 MIR888-201ENST00000401186 77 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 RHEBP3-201ENST00000411920 351 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 VN1R36P-201ENST00000414936 291 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 AL627311.1-201ENST00000431514 115 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 AC005019.1-201ENST00000436455 431 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 AL078601.1-201ENST00000444542 271 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 HMGB3P8-201ENST00000449709 577 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 AC092798.1-201ENST00000458542 409 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 RPL32P34-201ENST00000486380 400 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 RNU1-103P-201ENST00000516502 125 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 RNU6-273P-201ENST00000516937 96 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 RNU6-703P-201ENST00000516946 107 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 AC069113.1-201ENST00000517763 267 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 AC105029.1-201ENST00000520250 669 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 RNU6-323P-201ENST00000521915 107 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 AC091516.1-201ENST00000549191 703 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 RPS3AP23-202ENST00000574601 686 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 MIR3672-201ENST00000584290 82 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 C8orf59P2-201ENST00000603441 271 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 AL355598.1-201ENST00000604169 202 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 FAM157A-202ENST00000615155 405 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 AC068831.7-201ENST00000616954 363 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 MIR7151-201ENST00000617477 60 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 RMST_7.1-201ENST00000621935 268 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 U6.99-201ENST00000637524 83 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC144NLQ6NUI1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms