Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.48□□□□□ -2.01
ATL3Q6DD88 RNU1-103P-201ENST00000516502 125 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 SCARNA16.3-201ENST00000516595 184 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ATL3Q6DD88 AP001646.1-201ENST00000527936 915 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ATL3Q6DD88 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ATL3Q6DD88 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.48□□□□□ -2.01
ATL3Q6DD88 ISCA1P3-201ENST00000577104 373 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ATL3Q6DD88 MIR4307-201ENST00000582802 84 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 AC008751.2-201ENST00000597885 980 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 AC135507.1-201ENST00000607214 561 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 AP000240.1-201ENST00000609910 452 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 TUSC7.1-201ENST00000610969 165 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 AL449363.1-201ENST00000617815 186 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 AL031667.3-201ENST00000620124 655 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.48□□□□□ -2.01
ATL3Q6DD88 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 Y_RNA.500-201ENST00000384466 111 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 AC119751.3-201ENST00000399720 670 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 OR6C5P-201ENST00000452388 923 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ATL3Q6DD88 SUMO2P6-201ENST00000505273 288 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 MRPS36P2-201ENST00000512569 299 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 RNA5SP281-201ENST00000516504 135 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 IGLV3-17-201ENST00000519099 244 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 AC013828.2-201ENST00000532487 235 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 LRRC37A5P-203ENST00000580181 585 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 MIR4298-201ENST00000584380 73 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 MIR4760-201ENST00000585040 80 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 AF038458.1-201ENST00000588406 262 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 BNIP3P23-201ENST00000599655 511 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 AL356280.1-201ENST00000603614 379 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 AC007038.2-201ENST00000608095 740 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 MIR6895-201ENST00000613497 78 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 AC091965.5-201ENST00000624785 342 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 AC097655.1-201ENST00000635075 318 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.47□□□□□ -2.01
ATL3Q6DD88 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ATL3Q6DD88 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ATL3Q6DD88 AC092125.1-201ENST00000562568 1995 ntBASIC2.47□□□□□ -2.01
ATL3Q6DD88 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC010329.5-201ENST00000623497 2174 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ATL3Q6DD88 RNU6-1072P-201ENST00000384703 107 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 RNU6-443P-201ENST00000384780 107 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 MIR144-201ENST00000384886 86 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ATL3Q6DD88 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC096649.2-201ENST00000416186 393 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.46□□□□□ -2.02
ATL3Q6DD88 USP12PX-201ENST00000432383 1057 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.46□□□□□ -2.02
ATL3Q6DD88 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC005094.1-201ENST00000440420 368 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC020550.1-201ENST00000447385 163 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 AL139109.1-201ENST00000455491 297 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 RPL26P9-201ENST00000457466 433 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 RNU7-59P-201ENST00000459101 61 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC008481.1-201ENST00000463278 396 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC126389.1-201ENST00000477436 290 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 RPL23AP49-201ENST00000492925 468 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC022447.1-201ENST00000515358 464 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 RNU1-40P-201ENST00000516816 164 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 RNU1-97P-201ENST00000516872 164 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC007115.1-201ENST00000546853 234 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC121758.2-201ENST00000553271 193 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.46□□□□□ -2.02
ATL3Q6DD88 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.46□□□□□ -2.02
ATL3Q6DD88 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.46□□□□□ -2.02
ATL3Q6DD88 MIR3117-201ENST00000584034 78 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 MIR4293-201ENST00000584305 78 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 MIR4658-201ENST00000584344 65 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 AP000403.1-201ENST00000603349 851 ntBASIC2.46□□□□□ -2.02
ATL3Q6DD88 AC007938.3-201ENST00000604965 623 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms