| HES3 | Q5TGS1 | ABBA01006766.1-201 | ENST00000584728 | 294 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC008507.2-201 | ENST00000588402 | 1176 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | BBIP1P1-201 | ENST00000602999 | 279 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | RPP40P2-201 | ENST00000603596 | 712 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC021749.1-201 | ENST00000604322 | 607 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AL589740.1-208 | ENST00000606913 | 812 nt | TSL 5 BASIC | 1.77 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | MIR6840-201 | ENST00000611937 | 71 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AL138478.1-201 | ENST00000612252 | 832 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | FP475955.2-201 | ENST00000623720 | 458 nt | TSL 2 BASIC | 1.77 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | RBMS3-AS3-202 | ENST00000635847 | 738 nt | TSL 5 BASIC | 1.77 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | EFCAB3-202 | ENST00000450662 | 1694 nt | TSL 5 BASIC | 1.77 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | EBAG9-210 | ENST00000620557 | 2186 nt | APPRIS P1 TSL 3 BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | EDDM3A-201 | ENST00000326842 | 927 nt | APPRIS P1 TSL 1 (best) BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | COMMD6-201 | ENST00000355801 | 486 nt | TSL 2 BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | SNORA63.3-201 | ENST00000362682 | 132 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | Y_RNA.508-201 | ENST00000384502 | 114 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | MIR499A-201 | ENST00000384903 | 122 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | Y_RNA.578-201 | ENST00000390903 | 88 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AL021407.1-201 | ENST00000404531 | 386 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | U3.37-201 | ENST00000408528 | 213 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | NDUFS5P4-201 | ENST00000412983 | 318 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AP1B1P2-201 | ENST00000416196 | 106 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | MTND4P3-201 | ENST00000417829 | 541 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | PCYT1B-AS1-201 | ENST00000432626 | 275 nt | TSL 2 BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AL139118.1-201 | ENST00000432707 | 446 nt | TSL 3 BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | TAF9P1-201 | ENST00000445421 | 515 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | SFTA1P-203 | ENST00000446372 | 693 nt | TSL 1 (best) BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | TAF9P2-201 | ENST00000454958 | 515 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC016903.2-201 | ENST00000456384 | 326 nt | TSL 3 BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC011998.3-201 | ENST00000457053 | 254 nt | TSL 3 BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | MTCO1P42-201 | ENST00000457379 | 726 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AL160314.1-201 | ENST00000490836 | 438 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC023141.11-201 | ENST00000508864 | 202 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | LINC02501-201 | ENST00000510420 | 426 nt | TSL 2 BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC093772.1-201 | ENST00000513519 | 506 nt | TSL 2 BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC110296.1-201 | ENST00000515680 | 341 nt | TSL 3 BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | OR6C7P-201 | ENST00000547875 | 934 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC010196.1-201 | ENST00000550014 | 450 nt | TSL 5 BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AGGF1P5-201 | ENST00000567900 | 919 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | MTND4LP25-201 | ENST00000570218 | 163 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC005951.2-201 | ENST00000576282 | 495 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC126365.2-201 | ENST00000580630 | 379 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AL357094.1-201 | ENST00000603845 | 844 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC022017.1-201 | ENST00000608793 | 559 nt | TSL 4 BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AL589743.7-201 | ENST00000612637 | 233 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC068506.1-202 | ENST00000613388 | 545 nt | TSL 3 BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AP002791.1-201 | ENST00000623291 | 381 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC012640.5-201 | ENST00000623897 | 319 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC068057.2-201 | ENST00000624047 | 895 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | PTP4A2-219 | ENST00000626355 | 606 nt | TSL 5 BASIC | 1.76 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC110491.1-201 | ENST00000562191 | 2010 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | PMCH-201 | ENST00000329406 | 766 nt | APPRIS P1 TSL 1 (best) BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | RNU6-884P-201 | ENST00000363889 | 107 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | RNU4-52P-201 | ENST00000384209 | 138 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | U3.40-201 | ENST00000408706 | 208 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | RNU2-49P-201 | ENST00000410666 | 184 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | RNU6-516P-201 | ENST00000411381 | 104 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | MTCYBP38-201 | ENST00000417160 | 1123 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC114808.2-201 | ENST00000428335 | 536 nt | TSL 4 BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | MED14P1-201 | ENST00000430517 | 648 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AL445488.1-202 | ENST00000430623 | 545 nt | TSL 3 BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | OR5H14-201 | ENST00000437310 | 1080 nt | APPRIS P1 BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC098831.1-201 | ENST00000440661 | 216 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC092473.1-201 | ENST00000441098 | 221 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC013267.1-201 | ENST00000458227 | 267 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | RPS29P11-201 | ENST00000496507 | 171 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC114912.1-201 | ENST00000503394 | 546 nt | TSL 3 BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC098591.2-201 | ENST00000510152 | 315 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC090857.2-201 | ENST00000526362 | 723 nt | TSL 2 BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | ZKSCAN7P1-201 | ENST00000543668 | 673 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | PPFIA2-AS1-205 | ENST00000550938 | 790 nt | TSL 3 BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | NACAP3-201 | ENST00000552100 | 481 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | SUB1P3-201 | ENST00000564581 | 315 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC023825.1-201 | ENST00000566704 | 1030 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | MIR4303-201 | ENST00000581299 | 66 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC002984.1-201 | ENST00000591692 | 448 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC124016.2-201 | ENST00000610058 | 665 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC010133.1-201 | ENST00000615809 | 842 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC019226.1-201 | ENST00000625666 | 515 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | GABRA2-209 | ENST00000510861 | 3411 nt | APPRIS P1 TSL 5 BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | CEP57-213 | ENST00000541150 | 2911 nt | APPRIS ALT2 TSL 5 BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AL390862.1-201 | ENST00000635467 | 1469 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | KPNA2P1-201 | ENST00000458289 | 1591 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | SNORA3A-201 | ENST00000364113 | 130 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | snoZ40.1-201 | ENST00000364540 | 72 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | RNA5SP160-201 | ENST00000364866 | 120 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | SNORA25.9-201 | ENST00000365087 | 128 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AKAP14-203 | ENST00000371425 | 793 nt | APPRIS ALT2 TSL 5 BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | RNU6-1207P-201 | ENST00000384343 | 107 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | SNORA67.5-201 | ENST00000391036 | 107 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | RNU6-952P-201 | ENST00000391164 | 108 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | ZNF365-203 | ENST00000395249 | 433 nt | TSL 1 (best) BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | TXNP7-201 | ENST00000406296 | 293 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | MIR1294-201 | ENST00000408503 | 142 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC068533.2-201 | ENST00000411872 | 306 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | TIMM9P2-201 | ENST00000419324 | 266 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AL356277.2-201 | ENST00000421318 | 441 nt | TSL 2 BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AC007560.1-201 | ENST00000426912 | 237 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | WARS2P1-201 | ENST00000429678 | 537 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HES3 | Q5TGS1 | AL356277.3-201 | ENST00000432484 | 618 nt | TSL 3 BASIC | 1.74 | □□□□□ -2.13 | | |