Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AC010591.1-201ENST00000603941 649 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AL161756.2-201ENST00000604597 246 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 LARP7P1-201ENST00000605576 316 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 RMST_3.1-201ENST00000611651 109 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AC024940.5-201ENST00000622889 474 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 U6.105-201ENST00000637379 88 ntBASIC4.03□□□□□ -1.76
LONRF3Q496Y0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LONRF3Q496Y0 AC006020.1-201ENST00000420179 1854 ntBASIC4.03□□□□□ -1.77
LONRF3Q496Y0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 Y_RNA.160-201ENST00000363677 92 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 RNU5E-6P-201ENST00000365574 115 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 RNU6-641P-201ENST00000384006 107 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 MIR490-201ENST00000384865 128 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 MIR183-201ENST00000384958 110 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AL356776.1-201ENST00000406574 447 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 RNU6-1068P-201ENST00000410958 103 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 OR9R1P-201ENST00000412200 877 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 RPL23AP82-202ENST00000427528 469 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AL158071.1-201ENST00000430315 461 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 RPL23AP69-201ENST00000431134 458 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 Z82210.1-201ENST00000440037 231 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 CYCSP35-201ENST00000451978 304 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 snoU13.28-201ENST00000459235 104 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AC126389.1-201ENST00000477436 290 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 MTCYBP18-201ENST00000501056 747 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AC026784.1-201ENST00000507986 352 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AC100870.1-201ENST00000522035 505 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 ATP5F1P5-201ENST00000526403 760 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AP001646.1-201ENST00000527936 915 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AC011602.1-201ENST00000546484 331 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 TRAV28-201ENST00000557548 323 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 BNIP3P9-201ENST00000603714 553 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AC007179.3-201ENST00000604976 235 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AC022149.2-201ENST00000621061 203 ntBASIC4.02□□□□□ -1.77
LONRF3Q496Y0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.02□□□□□ -1.77
LONRF3Q496Y0 AC092435.3-201ENST00000565538 3654 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 SNORD9-201ENST00000362566 104 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 RNU6-1284P-201ENST00000363701 100 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 MIR454-201ENST00000390180 115 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 NDUFS5P1-201ENST00000405668 289 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 RNU2-39P-201ENST00000410604 198 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 Z85995.1-201ENST00000415547 335 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 HMGB1P27-201ENST00000431429 603 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 SNRPEP8-201ENST00000442866 260 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 AC020550.1-201ENST00000447385 163 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 AC010099.1-201ENST00000455434 375 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 RPS20P22-201ENST00000473700 357 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 AC008628.2-201ENST00000502605 298 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 AC116562.3-201ENST00000506136 177 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 AC114781.4-201ENST00000513707 639 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 RNU6-507P-201ENST00000516045 100 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 AC068587.5-201ENST00000528506 175 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 OR5BN1P-201ENST00000532955 829 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 AC007458.1-201ENST00000542812 373 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 DISC2.1-201ENST00000612827 205 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 AC093648.1-201ENST00000623546 606 ntBASIC4.01□□□□□ -1.77
LONRF3Q496Y0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LONRF3Q496Y0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
LONRF3Q496Y0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4□□□□□ -1.77
LONRF3Q496Y0 Y_RNA.255-201ENST00000364581 97 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 RNU6-996P-201ENST00000365438 107 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 RNVU1-14-201ENST00000384770 164 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4□□□□□ -1.77
LONRF3Q496Y0 ATP5A1P2-201ENST00000412323 255 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 RPL21P111-201ENST00000418453 477 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 DBIP2-201ENST00000419076 262 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4□□□□□ -1.77
LONRF3Q496Y0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4□□□□□ -1.77
LONRF3Q496Y0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4□□□□□ -1.77
LONRF3Q496Y0 MTND4P25-201ENST00000441039 533 ntBASIC4□□□□□ -1.77
LONRF3Q496Y0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms