Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 Z99289.3-201ENST00000605586 594 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 OR2AS2P-201ENST00000606902 342 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 AC004223.4-201ENST00000612426 332 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 AC104010.1-201ENST00000616889 150 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.2□□□□□ -2.06
RFX4Q33E94 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 AC131159.1-201ENST00000621854 213 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
RFX4Q33E94 AC016717.2-201ENST00000609089 5141 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RFX4Q33E94 RNU5F-6P-201ENST00000362979 116 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 RNU1-52P-201ENST00000384190 164 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 RNU6-140P-201ENST00000384566 108 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.19□□□□□ -2.06
RFX4Q33E94 AC005005.2-201ENST00000420779 380 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 ZNF863P-201ENST00000426746 417 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 AC063976.3-201ENST00000426849 329 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 AL365184.2-201ENST00000431139 435 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 RPL37P21-201ENST00000435890 276 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 COX6CP12-201ENST00000446748 202 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 EPS15P1-201ENST00000448836 336 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.19□□□□□ -2.06
RFX4Q33E94 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.19□□□□□ -2.06
RFX4Q33E94 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.19□□□□□ -2.06
RFX4Q33E94 AC104435.1-201ENST00000483483 166 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 RPL36AP51-201ENST00000487216 318 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 RPS29P20-201ENST00000489592 171 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 MTND5P13-201ENST00000513046 1079 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 RNU6-927P-201ENST00000516199 100 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 AP000889.2-201ENST00000532684 490 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.19□□□□□ -2.06
RFX4Q33E94 ZNF519P3-201ENST00000557158 1032 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.19□□□□□ -2.06
RFX4Q33E94 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.19□□□□□ -2.06
RFX4Q33E94 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.19□□□□□ -2.06
RFX4Q33E94 MTCYBP22-201ENST00000603788 447 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 AL161729.4-201ENST00000604650 476 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.19□□□□□ -2.06
RFX4Q33E94 FTX_3.1-201ENST00000610451 147 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 HMGB1P24-202ENST00000615653 685 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 AC009159.1-201ENST00000618386 642 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.19□□□□□ -2.06
RFX4Q33E94 AL445523.1-201ENST00000451184 1362 ntBASIC2.19□□□□□ -2.06
RFX4Q33E94 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFX4Q33E94 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.19□□□□□ -2.06
RFX4Q33E94 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFX4Q33E94 CKAP2P1-201ENST00000555477 2049 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 AC022336.2-201ENST00000568966 2538 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.18□□□□□ -2.06
RFX4Q33E94 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RFX4Q33E94 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.18□□□□□ -2.06
RFX4Q33E94 MTND1P23-201ENST00000416931 372 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 BTF3L4P3-201ENST00000418879 476 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.18□□□□□ -2.06
RFX4Q33E94 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.18□□□□□ -2.06
RFX4Q33E94 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.18□□□□□ -2.06
RFX4Q33E94 AC098614.2-201ENST00000426040 255 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 GTF2IP20-201ENST00000431663 360 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.18□□□□□ -2.06
RFX4Q33E94 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.18□□□□□ -2.06
RFX4Q33E94 AL512286.1-201ENST00000439244 400 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 AC118469.1-201ENST00000442943 488 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 DPPA3P1-201ENST00000448050 469 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 ZNF114P1-201ENST00000453500 292 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 RNU7-125P-201ENST00000458760 62 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 MTND4LP3-201ENST00000468320 276 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 RPL23AP41-201ENST00000484754 458 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.18□□□□□ -2.06
RFX4Q33E94 SUMO2P6-201ENST00000505273 288 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 AC005178.1-201ENST00000508392 440 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 AC114797.1-201ENST00000514003 728 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 RNA5SP320-201ENST00000516263 124 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 RN7SKP258-201ENST00000517151 304 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.18□□□□□ -2.06
RFX4Q33E94 ATP5F1P5-201ENST00000526403 760 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.18□□□□□ -2.06
RFX4Q33E94 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.18□□□□□ -2.06
RFX4Q33E94 AC093012.1-202ENST00000549403 582 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.18□□□□□ -2.06
RFX4Q33E94 HMGN2P15-201ENST00000585707 270 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.18□□□□□ -2.06
RFX4Q33E94 MTND4LP5-201ENST00000605152 292 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 AC018638.7-201ENST00000605836 1114 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 AC006927.3-201ENST00000638789 384 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RFX4Q33E94 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
RFX4Q33E94 AC069528.2-201ENST00000624849 1991 ntBASIC2.18□□□□□ -2.06
RFX4Q33E94 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RFX4Q33E94 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RFX4Q33E94 SNORA80A-201ENST00000363922 136 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 RNU6-501P-201ENST00000364072 100 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 U3.26-201ENST00000391236 204 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AL122016.1-201ENST00000403365 367 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 NDUFB4P4-201ENST00000404822 243 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.17□□□□□ -2.06
RFX4Q33E94 USP9YP13-201ENST00000417797 480 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.17□□□□□ -2.06
RFX4Q33E94 MTCO3P30-201ENST00000426425 670 ntBASIC2.17□□□□□ -2.06
RFX4Q33E94 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RFX4Q33E94 MTCYBP39-201ENST00000437562 491 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms