Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RNU1-107P-201ENST00000516617 154 ntBASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 RN7SKP277-201ENST00000516895 283 ntBASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 KLKP1-201ENST00000595979 403 ntBASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 AC105254.2-201ENST00000603636 436 ntBASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 AC008814.1-201ENST00000603797 406 ntBASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 RPL23AP88-201ENST00000605759 454 ntBASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 RNU6-6P-201ENST00000606623 107 ntBASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 AC006001.4-201ENST00000622243 395 ntBASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 AL596275.2-206ENST00000641957 626 ntBASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 AL079305.1-201ENST00000623159 3008 ntBASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CTC1Q2NKJ3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 AC009812.4-201ENST00000569134 1805 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 Y_RNA.121-201ENST00000363309 113 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 RNU6-275P-201ENST00000364910 107 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 OR1L6-202ENST00000373684 1044 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 Y_RNA.388-201ENST00000383919 113 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 RNU6-339P-201ENST00000384310 107 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 RPS4XP3-201ENST00000398541 413 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 AC063979.1-201ENST00000415539 377 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 RPL7AP25-201ENST00000423357 805 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 RPL23AP58-201ENST00000440453 469 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 AC016700.2-201ENST00000446011 156 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 HIGD1AP2-201ENST00000446367 280 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 AC117440.1-201ENST00000474107 571 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 MRPS33P2-201ENST00000507850 322 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 HMGB3P16-201ENST00000508037 287 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 AC006499.6-201ENST00000511169 607 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 RN7SKP179-201ENST00000516126 217 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 AC103783.1-201ENST00000520506 373 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 AL590392.1-201ENST00000604960 446 ntBASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CTC1Q2NKJ3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 Y_RNA.123-201ENST00000363338 102 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 RNU6-899P-201ENST00000363947 107 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 RNU4-17P-201ENST00000365598 141 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 Y_RNA.570-201ENST00000384750 101 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 SNORD12B-201ENST00000410433 91 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 RPL19P16-201ENST00000433839 588 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 Y_RNA.797-201ENST00000515977 94 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 RNU6-638P-201ENST00000516582 104 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 RNU6-914P-201ENST00000516749 109 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 SCARNA20.4-201ENST00000516969 131 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 AC022616.8-201ENST00000533569 253 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 AC103996.1-201ENST00000555468 102 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 RN7SL690P-201ENST00000582087 240 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 AL162431.4-201ENST00000604674 411 ntBASIC5.4□□□□□ -1.54
CTC1Q2NKJ3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CTC1Q2NKJ3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTC1Q2NKJ3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CTC1Q2NKJ3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CTC1Q2NKJ3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.4□□□□□ -1.55
CTC1Q2NKJ3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTC1Q2NKJ3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 RNU6-1175P-201ENST00000365200 107 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 SNORA66-201ENST00000384792 133 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 SNORA40.19-201ENST00000390846 128 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 TBCAP2-201ENST00000416175 326 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 RPL30P3-201ENST00000424262 333 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 RPS15AP7-201ENST00000439294 405 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms