Protein–RNA interactions for Protein: Q15270

NKX1-1, NK1 transcription factor-related protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1Q15270 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NKX1-1Q15270 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NKX1-1Q15270 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
NKX1-1Q15270 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.38□□□□□ -1.39
NKX1-1Q15270 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NKX1-1Q15270 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
NKX1-1Q15270 Y_RNA.217-201ENST00000364214 105 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 SNORD116-18-201ENST00000383961 92 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 Y_RNA.488-201ENST00000384403 102 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 U3.22-201ENST00000391120 215 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 HLFP1-201ENST00000402375 499 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 AL357515.1-201ENST00000402967 542 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 OOSP1P1-201ENST00000423265 274 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC6.38□□□□□ -1.39
NKX1-1Q15270 Y_RNA.641-201ENST00000459414 105 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 AC005840.1-201ENST00000498412 377 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 AC097462.2-201ENST00000504623 481 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC6.38□□□□□ -1.39
NKX1-1Q15270 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.38□□□□□ -1.39
NKX1-1Q15270 SNORA70.16-201ENST00000516390 95 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 AL110118.1-201ENST00000553543 400 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 CYCSP39-201ENST00000565821 309 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 AC022726.1-201ENST00000587475 207 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 AC005828.6-201ENST00000606610 232 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.38□□□□□ -1.39
NKX1-1Q15270 MESTIT1_1.1-201ENST00000618871 140 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
NKX1-1Q15270 ZNF204P-201ENST00000416749 2397 ntBASIC6.38□□□□□ -1.39
NKX1-1Q15270 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NKX1-1Q15270 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NKX1-1Q15270 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NKX1-1Q15270 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NKX1-1Q15270 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NKX1-1Q15270 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NKX1-1Q15270 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
NKX1-1Q15270 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NKX1-1Q15270 RNU1-108P-201ENST00000362556 161 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 RNU6-1290P-201ENST00000362957 109 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 RNU6-312P-201ENST00000364629 107 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 RNU6-213P-201ENST00000384051 104 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 U8.10-201ENST00000384260 133 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 MIR124-3-201ENST00000384866 87 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 AL357139.1-201ENST00000407792 426 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 U3.32-201ENST00000408116 212 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 AL732292.1-201ENST00000426692 226 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 MRPS21P3-201ENST00000436696 262 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 AC016831.4-201ENST00000438302 307 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.37□□□□□ -1.39
NKX1-1Q15270 AC074133.1-201ENST00000515696 183 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 RNY3P16-201ENST00000516338 101 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 PARP1P2-201ENST00000556806 195 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 AL133393.1-201ENST00000603277 287 ntBASIC6.37□□□□□ -1.39
NKX1-1Q15270 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.37□□□□□ -1.39
NKX1-1Q15270 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NKX1-1Q15270 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.37□□□□□ -1.39
NKX1-1Q15270 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NKX1-1Q15270 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.37□□□□□ -1.39
NKX1-1Q15270 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
NKX1-1Q15270 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NKX1-1Q15270 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
NKX1-1Q15270 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX1-1Q15270 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX1-1Q15270 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX1-1Q15270 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NKX1-1Q15270 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
NKX1-1Q15270 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX1-1Q15270 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NKX1-1Q15270 SNORD32A-201ENST00000364805 84 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 Y_RNA.400-201ENST00000383963 111 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 AL035079.1-201ENST00000405210 287 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX1-1Q15270 GPM6BP3-201ENST00000442797 145 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 RPL37P4-201ENST00000448908 268 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 AL691482.1-201ENST00000453255 87 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 AC093840.1-201ENST00000511599 336 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC6.36□□□□□ -1.39
NKX1-1Q15270 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX1-1Q15270 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.36□□□□□ -1.39
NKX1-1Q15270 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.36□□□□□ -1.39
NKX1-1Q15270 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC6.36□□□□□ -1.39
NKX1-1Q15270 ATP5J2P6-201ENST00000565203 266 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 MIR5571-201ENST00000577998 113 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 RN7SL290P-201ENST00000578661 300 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 AL356218.2-201ENST00000605264 187 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 AC022441.3-201ENST00000605737 136 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 FAM27B-201ENST00000610601 213 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 AL022401.1-201ENST00000619498 108 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NKX1-1Q15270 AC135776.4-201ENST00000624300 1904 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 AC139713.2-214ENST00000642059 1811 ntBASIC6.36□□□□□ -1.39
NKX1-1Q15270 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.36□□□□□ -1.39
NKX1-1Q15270 MARK2P15-201ENST00000432204 2186 ntBASIC6.35□□□□□ -1.39
NKX1-1Q15270 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
NKX1-1Q15270 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.35□□□□□ -1.39
NKX1-1Q15270 RNU6-961P-201ENST00000363893 105 ntBASIC6.35□□□□□ -1.39
NKX1-1Q15270 Y_RNA.357-201ENST00000365487 109 ntBASIC6.35□□□□□ -1.39
NKX1-1Q15270 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX1-1Q15270 RNU6-140P-201ENST00000384566 108 ntBASIC6.35□□□□□ -1.39
NKX1-1Q15270 RNA5SP397-201ENST00000391323 118 ntBASIC6.35□□□□□ -1.39
NKX1-1Q15270 RPS12P23-201ENST00000419579 400 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms